Difference between revisions of "Tiso gene 11832"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UMP UMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)) * inchi key: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14026 RXN-14026] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UMP UMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14026 RXN-14026] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DJJCXFVJDGTHFX-XVFCMESISA-L
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* common name:
 
* common name:
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** UMP
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** 5_deoxy_cytosolic_type_c_protein
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* molecular weight:
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** 322.168   
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** ORF
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** 5_-nucleotidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.91 EC-3.1.3.91]
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
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** uridylate
 
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** 5'-UMP
 
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** uridine 5'-phosphate
 
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** 5'-uridylic acid (8CI)(9CI)
 
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** uridine monophosphate
 
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** uridine 5'-monophosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[UMPKf]]
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* With identifiers:
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* [[RXN-14025]]
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** 1 [[WATER]][c] '''+''' 1 [[CMP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CYTIDINE]][c]
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* [[UMPP]]
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* With common name(s):
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* [[RXN-12002]]
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** 1 H2O[c] '''+''' 1 CMP[c] '''=>''' 1 phosphate[c] '''+''' 1 cytidine[c]
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== Reaction(s) known to produce the compound ==
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* [[orPDC]]
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== Genes associated with this reaction  ==
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* [[UTPPH]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GTUP]]
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* [[Tiso_gene_6988]]
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* [[AUPT]]
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** IN-SILICO_ANNOTATION
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* [[OROTPDECARB-RXN]]
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***EC-NUMBER
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* [[UTUP]]
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** [[pantograph]]-[[esiliculosus]]
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* [[DGTUP]]
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* [[Tiso_gene_6640]]
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* [[RXN-11347]]
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** [[pantograph]]-[[esiliculosus]]
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* [[DUTUP]]
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* [[Tiso_gene_13929]]
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* [[DCTUP]]
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** IN-SILICO_ANNOTATION
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* [[2.7.8.15-RXN]]
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***EC-NUMBER
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* [[DATUP]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14139]]
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* [[Tiso_gene_14435]]
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* [[RXN-12197]]
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** IN-SILICO_ANNOTATION
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* [[UPH]]
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***EC-NUMBER
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* [[DTTUP]]
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* [[Tiso_gene_5911]]
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* [[RXN-12199]]
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** IN-SILICO_ANNOTATION
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* [[URIDINEKIN-RXN]]
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***AUTOMATED-NAME-MATCH
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* [[ITUP]]
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* [[Tiso_gene_14434]]
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* [[URACIL-PRIBOSYLTRANS-RXN]]
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** IN-SILICO_ANNOTATION
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* [[PHOSNACMURPENTATRANS-RXN]]
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***EC-NUMBER
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_14246]]
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* [[RXN-8975]]
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** IN-SILICO_ANNOTATION
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* [[URKI-RXN]]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 58-97-9
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* RHEA:
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* METABOLIGHTS : MTBLC57865
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29368 29368]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1778309 1778309]
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** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511]
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* HMDB : HMDB00288
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00105 C00105]
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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* CHEMSPIDER:
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{{#set: common name=ORF}}
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** [http://www.chemspider.com/Chemical-Structure.1399139.html 1399139]
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{{#set: common name=5_-nucleotidase}}
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* CHEBI:
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{{#set: ec number=EC-3.1.3.91}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57865 57865]
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{{#set: ec number=EC-3.1.3.5}}
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* BIGG : ump
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{{#set: gene associated=Tiso_gene_6988|Tiso_gene_6640|Tiso_gene_13929|Tiso_gene_14435|Tiso_gene_5911|Tiso_gene_14434|Tiso_gene_14246}}
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: in pathway=PWY-7185}}
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{{#set: inchi key=InChIKey=DJJCXFVJDGTHFX-XVFCMESISA-L}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=UMP}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: molecular weight=322.168    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=uridylate|5'-UMP|uridine 5'-phosphate|5'-uridylic acid (8CI)(9CI)|uridine monophosphate|uridine 5'-monophosphate}}
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{{#set: consumed by=UMPKf|RXN-14025|UMPP|RXN-12002}}
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{{#set: produced by=orPDC|UTPPH|GTUP|AUPT|OROTPDECARB-RXN|UTUP|DGTUP|RXN-11347|DUTUP|DCTUP|2.7.8.15-RXN|DATUP|RXN-14139|RXN-12197|UPH|DTTUP|RXN-12199|URIDINEKIN-RXN|ITUP|URACIL-PRIBOSYLTRANS-RXN|PHOSNACMURPENTATRANS-RXN}}
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{{#set: consumed or produced by=RXN-8975|URKI-RXN}}
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Revision as of 19:17, 18 March 2018

Reaction RXN-14026

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_deoxy_cytosolic_type_c_protein
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
    • 5_-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 CMP[c] => 1 phosphate[c] + 1 cytidine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11832&oldid=23212"