Difference between revisions of "PWY-5737"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-palmitoyl-[acyl-carrier...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17848 RXN-17848] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** leucyl_phenylalanyl-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17848 RXN-17848] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxo-palmitoyl-[acyl-carrier protein] synthase
+
** ORF
−
** 3-oxoacyl-synthase
+
** leucyl_phenylalanyl-trna--protein_transferase
 +
** leucyl_phenylalanyl-trna--protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-palmitoyl-ACPs]][c]
+
** 1 [[Protein-N-terminal-L-Lysine]][c] '''+''' 1 [[Charged-PHE-tRNAs]][c] '''=>''' 1 [[L-phenylalanyl-L-lysyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHE-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a myristoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-palmitoyl-[acp][c]
+
** 1 an N-terminal L-lysyl-[protein][c] '''+''' 1 an L-phenylalanyl-[tRNAphe][c] '''=>''' 1 L-phenylalanyl-L-lysyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 a tRNAphe[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5939]]
+
* [[Tiso_gene_2584]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_13698]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8540]]
 +
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_15991]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_19302]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14485]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-palmitoyl-[acyl-carrier protein] synthase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
−
{{#set: gene associated=Tiso_gene_5939|Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485}}
+
{{#set: ec number=EC-2.3.2.6}}
−
{{#set: in pathway=PWY-5971}}
+
{{#set: gene associated=Tiso_gene_2584|Tiso_gene_13698|Tiso_gene_8540}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:18, 18 March 2018

Reaction RXN-17848

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • leucyl_phenylalanyl-trna--protein_transferase
    • leucyl_phenylalanyl-trna--protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5737&oldid=23303"