Difference between revisions of "THIOREDOX-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7664 RXN-7664] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_re...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7664 RXN-7664] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** geranylgeranyl_diphosphate_reductase
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** L-isoleucine degradation I
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''6''' reactions in the full pathway
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7005]][c] '''=>''' 1 [[CPD-7004]][c] '''+''' 1 [[NADP]][c]
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* [[2KETO-3METHYLVALERATE-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 geranylgeranyl chlorophyll a[c] '''=>''' 1 dihydrogeranylgeranyl chlorophyll a[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_3260]]
 
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*** [[Tiso_gene_18084]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_11793]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_2613]]
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*** [[orthology-creinhardtii]]
** IN-SILICO_ANNOTATION
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
***AUTOMATED-NAME-MATCH
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** 3 associated gene(s):
** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_14984]]
***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_18403]]
== Pathways  ==
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*** [[Tiso_gene_17748]]
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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** 7 reconstruction source(s) associated:
** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
* [[annotation]]:
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*** [[annotation-in-silico_annotation]]
** [[pathwaytools]]:
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*** [[orthology-athaliana]]
*** [[experimental_annotation]]
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*** [[orthology-synechocystis]]
*** [[in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_15327]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_14257]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_6885]]
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_16145]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2-METHYLACYL-COA-DEHYDROGENASE-RXN 2-METHYLACYL-COA-DEHYDROGENASE-RXN]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2759}}
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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{{#set: taxonomic range=TAX-2157}}
{{#set: gene associated=Tiso_gene_2613}}
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{{#set: taxonomic range=TAX-2}}
{{#set: in pathway=PWY-5064}}
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{{#set: common name=L-isoleucine degradation I}}
{{#set: reconstruction category=annotation}}
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{{#set: reaction found=4}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=6}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: completion rate=67.0}}

Revision as of 18:20, 18 March 2018

Pathway ILEUDEG-PWY

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links