Difference between revisions of "PWY-7007"

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(Created page with "Category:Gene == Gene Tiso_gene_2386 == * left end position: ** 5150 * transcription direction: ** NEGATIVE * right end position: ** 6336 * centisome position: ** 24.06429...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13001 RXN-13001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2386 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13001 RXN-13001] ==
* left end position:
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* direction:
** 5150
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
* right end position:
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** 6336
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* centisome position:
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** 24.064297   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[RXN-11832]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-14419]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14420]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 3R-hydroxy-icosatrienoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 icosatrienoyl-2-enoyl CoA[c]
***ec-number
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* [[RXN-12002]]
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== Genes associated with this reaction  ==
** in-silico_annotation
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== Pathways  ==
***ec-number
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* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
** experimental_annotation
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** '''7''' reactions found over '''7''' reactions in the full pathway
***ec-number
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* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
* [[RXN-7913]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
** in-silico_annotation
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
***ec-number
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** '''5''' reactions found over '''7''' reactions in the full pathway
** experimental_annotation
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== Reconstruction information  ==
***ec-number
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* Category: [[annotation]]
== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
* [[PWY-7205]]
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*** Tool: [[pathwaytools]]
* [[PWY-7197]]
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* [[PWY-7176]]
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== External links  ==
 
== External links  ==
{{#set: left end position=5150}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.134}}
{{#set: right end position=6336}}
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{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
{{#set: centisome position=24.064297    }}
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{{#set: reconstruction category=annotation}}
{{#set: reaction associated=RXN-11832|RXN-12002|RXN-7913}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: pathway associated=PWY-7205|PWY-7197|PWY-7176}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:21, 18 March 2018

Reaction RXN-13001

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3R-hydroxy-icosatrienoyl-CoA[c] => 1 H2O[c] + 1 icosatrienoyl-2-enoyl CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7619, juniperonate biosynthesis: PWY-7619
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links