Difference between revisions of "AMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-L-fucose syntha...")
(Created page with "Category:Gene == Gene Tiso_gene_8048 == * left end position: ** 4977 * transcription direction: ** NEGATIVE * right end position: ** 7709 * centisome position: ** 47.04158...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] ==
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== Gene Tiso_gene_8048 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4977
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* common name:
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* transcription direction:
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** GDP-L-fucose synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.271 EC-1.1.1.271]
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** 7709
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* centisome position:
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** 47.041588   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-15556]]
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** 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13118]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 GDP-4-dehydro-α-D-rhamnose[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 GDP-β-L-fucose[c]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_16970]]
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* [[PWY-7511]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4977}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18885 18885]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7709}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
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{{#set: centisome position=47.041588    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: common name=GDP-L-fucose synthase}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: ec number=EC-1.1.1.271}}
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{{#set: gene associated=Tiso_gene_16970}}
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{{#set: in pathway=PWY-66}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 18:22, 18 March 2018

Gene Tiso_gene_8048

  • left end position:
    • 4977
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7709
  • centisome position:
    • 47.041588
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=AMP&oldid=23849"