Difference between revisions of "PWY-6317"

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(Created page with "Category:Gene == Gene Tiso_gene_16284 == * left end position: ** 1908 * transcription direction: ** NEGATIVE * right end position: ** 4251 * centisome position: ** 42.6750...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_16284 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
* left end position:
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* direction:
** 1908
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
* right end position:
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** 4251
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* centisome position:
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** 42.675014   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[FARNESYLTRANSTRANSFERASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PRENAL]][c] '''+''' 1 [[CPD-12935]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 3-methyl-2-butenal[c] '''+''' 1 4'-apo-β-carotenal[c]
***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4653]]
* [[FPPSYN-RXN]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
* [[GGPS]]
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* [[Tiso_gene_7740]]
** [[pantograph]]-[[creinhardtii]]
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* [[GPPS]]
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** [[pantograph]]-[[creinhardtii]]
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* [[GPPSYN-RXN]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
== Pathways associated ==
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
* [[PWY-7736]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7492]]
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== Reconstruction information  ==
* [[PWY-6659]]
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* Category: [[orthology]]
* [[PWY-6383]]
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** Source: [[orthology-esiliculosus]]
* [[PWY-6691]]
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*** Tool: [[pantograph]]
* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-7102]]
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* [[PWY-7182]]
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* [[PWY-5120]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7141]]
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* [[PWY-7720]]
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* [[PWY-7721]]
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* [[PWY-7517]]
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* [[PWY-7410]]
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* [[PWY-7659]]
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== External links  ==
 
== External links  ==
{{#set: left end position=1908}}
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* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
{{#set: right end position=4251}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=42.675014    }}
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{{#set: ec number=EC-1.13.11.59}}
{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN|FPPSYN-RXN|GGPS|GPPS|GPPSYN-RXN}}
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{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6383|PWY-6691|PWY-6859|PWY-7709|PWY-7102|PWY-7182|PWY-5120|PWY-5123|PWY-5122|PWY-7141|PWY-7720|PWY-7721|PWY-7517|PWY-7410|PWY-7659}}
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{{#set: in pathway=PWY-6681}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:25, 18 March 2018

Reaction RXN-11989

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 torulene[c] + 1 oxygen[c] => 1 3-methyl-2-butenal[c] + 1 4'-apo-β-carotenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links