Difference between revisions of "CPD-8652"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE SQUALENE] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C * inchi key...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE SQUALENE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C
 +
* inchi key:
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** InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N
 
* common name:
 
* common name:
** polyketide_synthase
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** squalene
** ORF
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* molecular weight:
** acyl-_synthetase
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** 410.725   
** long_chain_acyl-_synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[5.4.99.17-RXN]]
** 1 [[CO-A]][c] '''+''' 1 [[PRISTANATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14675]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 coenzyme A[c] '''+''' 1 pristanate[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 pristanoyl-CoA[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 111-02-4
{{#set: common name=polyketide_synthase}}
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* LIPID_MAPS : LMPR0106010002
{{#set: common name=ORF}}
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* PUBCHEM:
{{#set: common name=acyl-_synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=638072 638072]
{{#set: common name=long_chain_acyl-_synthetase}}
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* HMDB : HMDB00256
{{#set: ec number=EC-6.2.1.3}}
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* LIGAND-CPD:
{{#set: gene associated=Tiso_gene_348|Tiso_gene_136|Tiso_gene_135|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_9394|Tiso_gene_500}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00751 C00751]
{{#set: in pathway=}}
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* CHEBI:
{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15440 15440]
{{#set: reconstruction tool=pantograph}}
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* METABOLIGHTS : MTBLC15440
{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C}}
{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=squalene}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: molecular weight=410.725    }}
 +
{{#set: consumed by=5.4.99.17-RXN}}

Revision as of 18:27, 18 March 2018

Metabolite SQUALENE

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C
  • inchi key:
    • InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N
  • common name:
    • squalene
  • molecular weight:
    • 410.725
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 111-02-4
  • LIPID_MAPS : LMPR0106010002
  • PUBCHEM:
  • HMDB : HMDB00256
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC15440