Difference between revisions of "Alkylated-Bases"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * ec num...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-COA LINOLENOYL-COA] == * smiles: ** CCC=CCC=CCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-COA LINOLENOYL-COA] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCC=CCC=CCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)([O-])OP(=O)([O-])OCC3(OC(N2(C=NC1(C(N)=NC=NC=12)))C(O)C(OP(=O)([O-])[O-])3)
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
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** InChIKey=OMKFKBGZHNJNEX-KZWMEWPFSA-J
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** [http://enzyme.expasy.org/EC/2.6.1.5 EC-2.6.1.5]
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* common name:
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** α-linolenoyl-CoA
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* molecular weight:
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** 1023.921   
 
* Synonym(s):
 
* Synonym(s):
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** 18:3Δ9,12,15
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** (9Z,12Z,15Z)-octadecatrienoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[FACOAE1839Z12Z15Z]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TYR]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[GLT]][c]
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* [[RXN-13441]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 2-oxoglutarate[c] '''+''' 1 L-tyrosine[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 L-glutamate[c]
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* [[LINOLENOYL-RXN]]
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* [[LNLNCACOAL]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17718]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_6815]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_10680]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5886]], 4-hydroxyphenylpyruvate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5886 PWY-5886]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5151]], L-tyrosine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7518]], atromentin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7518 PWY-7518]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7514 PWY-7514]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5048]], rosmarinic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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* [[manual]]:
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** [[primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-CPD:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15093 15093]
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** [http://www.genome.jp/dbget-bin/www_bget?C16162 C16162]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=51985 51985]
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* UNIPROT:
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* METABOLIGHTS : MTBLC51985
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** [http://www.uniprot.org/uniprot/P74861 P74861]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49859601 49859601]
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** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
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* HMDB : HMDB06290
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** [http://www.uniprot.org/uniprot/P95468 P95468]
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{{#set: smiles=CCC=CCC=CCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)([O-])OP(=O)([O-])OCC3(OC(N2(C=NC1(C(N)=NC=NC=12)))C(O)C(OP(=O)([O-])[O-])3)}}
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** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
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{{#set: inchi key=InChIKey=OMKFKBGZHNJNEX-KZWMEWPFSA-J}}
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** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
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{{#set: common name=&alpha;-linolenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
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{{#set: molecular weight=1023.921    }}
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** [http://www.uniprot.org/uniprot/O58489 O58489]
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{{#set: common name=18:3&Delta;9,12,15|(9Z,12Z,15Z)-octadecatrienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O59096 O59096]
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{{#set: consumed by=FACOAE1839Z12Z15Z|RXN-13441}}
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** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
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{{#set: produced by=LINOLENOYL-RXN|LNLNCACOAL}}
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** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
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** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
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** [http://www.uniprot.org/uniprot/Q02636 Q02636]
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** [http://www.uniprot.org/uniprot/O84642 O84642]
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** [http://www.uniprot.org/uniprot/P17735 P17735]
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** [http://www.uniprot.org/uniprot/Q7M4A9 Q7M4A9]
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** [http://www.uniprot.org/uniprot/P04693 P04693]
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** [http://www.uniprot.org/uniprot/P04694 P04694]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.57}}
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{{#set: ec number=EC-2.6.1.5}}
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{{#set: gene associated=Tiso_gene_17718|Tiso_gene_6815|Tiso_gene_10680}}
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{{#set: in pathway=PWY-3581|TYRFUMCAT-PWY|PWY-5886|PWY-5151|PWY-7518|TYRSYN|PWY3O-4108|PWY-5754|PWY-7514|PWY-5048}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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Revision as of 19:27, 18 March 2018

Metabolite LINOLENOYL-COA

  • smiles:
    • CCC=CCC=CCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)([O-])OP(=O)([O-])OCC3(OC(N2(C=NC1(C(N)=NC=NC=12)))C(O)C(OP(=O)([O-])[O-])3)
  • inchi key:
    • InChIKey=OMKFKBGZHNJNEX-KZWMEWPFSA-J
  • common name:
    • α-linolenoyl-CoA
  • molecular weight:
    • 1023.921
  • Synonym(s):
    • 18:3Δ9,12,15
    • (9Z,12Z,15Z)-octadecatrienoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC51985
  • PUBCHEM:
  • HMDB : HMDB06290
"CCC=CCC=CCC=CCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)([O-])OP(=O)([O-])OCC3(OC(N2(C=NC1(C(N)=NC=NC=12)))C(O)C(OP(=O)([O-])[O-])3)" cannot be used as a page name in this wiki.




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