Difference between revisions of "PWY-5"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1K-87 RXN1K-87] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1K-87 RXN1K-87] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
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** L-arginine degradation VI (arginase 2 pathway)
 
* Synonym(s):
 
* Synonym(s):
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** L-proline biosynthesis from arginine
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-787]][c] '''=>''' 1 [[CPD-786]][c]
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* [[ARGINASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 (2Z,4Z)-2-hydroxyhepta-2,4-dienedioate[c] '''=>''' 1 (4Z)-2-oxohept-4-enedioate[c]
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*** [[Tiso_gene_4415]]
 
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** 4 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
* [[Tiso_gene_19690]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[athaliana]]
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*** [[orthology-esiliculosus]]
== Pathways  ==
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
== Reconstruction information  ==
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** 1 associated gene(s):
* [[orthology]]:
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*** [[Tiso_gene_11231]]
** [[pantograph]]:
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** 1 reconstruction source(s) associated:
*** [[athaliana]]
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*** [[orthology-synechocystis]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_8625]]
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*** [[Tiso_gene_19254]]
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*** [[Tiso_gene_17059]]
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*** [[Tiso_gene_20218]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.genome.jp/dbget-bin/www_bget?R04134 R04134]
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{{#set: taxonomic range=TAX-1117}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
{{#set: gene associated=Tiso_gene_19690}}
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{{#set: common name=L-arginine degradation VI (arginase 2 pathway)}}
{{#set: in pathway=}}
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{{#set: common name=L-proline biosynthesis from arginine}}
{{#set: reconstruction category=orthology}}
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{{#set: reaction found=4}}
{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=4}}
{{#set: reconstruction source=athaliana}}
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{{#set: completion rate=100.0}}

Revision as of 18:27, 18 March 2018

Pathway ARG-PRO-PWY

  • taxonomic range:
  • common name:
    • L-arginine degradation VI (arginase 2 pathway)
  • Synonym(s):
    • L-proline biosynthesis from arginine

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links