Difference between revisions of "Tiso gene 11001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** chitobiosyldiphosph...")
(Created page with "Category:Gene == Gene Tiso_gene_17601 == * left end position: ** 312 * transcription direction: ** NEGATIVE * right end position: ** 3091 * centisome position: ** 8.69323...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] ==
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== Gene Tiso_gene_17601 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 312
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* common name:
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* transcription direction:
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** chitobiosyldiphosphodolichol_beta-
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.142 EC-2.4.1.142]
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** 3091
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* centisome position:
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** 8.69323   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[TRANSALDOL-RXN]]
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** 1 [[NN-DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 GDP[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[P124-PWY]]
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* [[Tiso_gene_8387]]
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* [[P185-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5723]]
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***EC-NUMBER
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* [[PWY-1861]]
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** [[pantograph]]-[[esiliculosus]]
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* [[NONOXIPENT-PWY]]
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== Pathways ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=312}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04502 R04502]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3091}}
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{{#set: common name=chitobiosyldiphosphodolichol_beta-}}
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{{#set: centisome position=8.69323    }}
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{{#set: ec number=EC-2.4.1.142}}
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{{#set: reaction associated=TRANSALDOL-RXN}}
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{{#set: gene associated=Tiso_gene_8387}}
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{{#set: pathway associated=P124-PWY|P185-PWY|PWY-5723|PWY-1861|NONOXIPENT-PWY}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:28, 18 March 2018

Gene Tiso_gene_17601

  • left end position:
    • 312
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3091
  • centisome position:
    • 8.69323
  • Synonym(s):

Reactions associated

  • TRANSALDOL-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11001&oldid=24609"