Difference between revisions of "Tiso gene 13892"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OBFOOLor OBFOOLor] == * direction: ** LEFT-TO-RIGHT * common name: ** obtusifoliol,NADPH:oxygen oxi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OBFOOLor OBFOOLor] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** obtusifoliol,NADPH:oxygen oxidoreductase (14-methyl cleaving)
+
** crotonate fermentation (to acetate and cyclohexane carboxylate)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''5''' reactions found over '''17''' reactions in the full pathway
−
** 1.0 [[OBTUSIFOLIOL]][c] '''+''' 2.0 [[PROTON]][c] '''+''' 3.0 [[NADPH]][c] '''+''' 3.0 [[OXYGEN-MOLECULE]][c] '''=>''' 4.0 [[WATER]][c] '''+''' 1.0 [[FORMATE]][c] '''+''' 1.0 [[ALPHA-METHYL-5-ALPHA-ERGOSTA]][c] '''+''' 3.0 [[NADP]][c]
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1.0 obtusifoliol[c] '''+''' 2.0 H+[c] '''+''' 3.0 NADPH[c] '''+''' 3.0 oxygen[c] '''=>''' 4.0 H2O[c] '''+''' 1.0 formate[c] '''+''' 1.0 4α-methyl-5α-ergosta-8,14,24(28)-trien-3β-ol[c] '''+''' 3.0 NADP+[c]
+
*** [[Tiso_gene_16181]]
−
 
+
*** [[Tiso_gene_15327]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_17451]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 4 reconstruction source(s) associated:
−
* [[Tiso_gene_8263]]
+
*** [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[orthology-creinhardtii]]
−
== Pathways  ==
+
*** [[orthology-synechocystis]]
−
== Reconstruction information  ==
+
*** [[orthology-esiliculosus]]
−
* [[orthology]]:
+
* [[RXN-11662]]
−
** [[pantograph]]:
+
** 7 associated gene(s):
−
*** [[creinhardtii]]
+
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_16703]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_18839]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-11667]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5857]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
* [[RXN-15013]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_7477]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
* [[RXN-8032]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_7195]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.259-RXN 1.1.1.259-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.100-RXN 4.2.1.100-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTARYL-COA-DEHYDROG-RXN GLUTARYL-COA-DEHYDROG-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=HADTHAUERA-RXN HADTHAUERA-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5535 PWY-5535]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5535 PWY-5535]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R265-RXN R265-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R282-RXN R282-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15008 RXN-15008]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15010 RXN-15010]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15012 RXN-15012]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=obtusifoliol,NADPH:oxygen oxidoreductase (14-methyl cleaving)}}
+
{{#set: common name=crotonate fermentation (to acetate and cyclohexane carboxylate)}}
−
{{#set: gene associated=Tiso_gene_8263}}
+
{{#set: reaction found=5}}
−
{{#set: in pathway=}}
+
{{#set: total reaction=17}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=29.0}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii}}
+

Revision as of 18:28, 18 March 2018

Pathway PWY-7401

  • taxonomic range:
  • common name:
    • crotonate fermentation (to acetate and cyclohexane carboxylate)
  • Synonym(s):

Reaction(s) found

5 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13892&oldid=24623"