Difference between revisions of "RXN1G-1247"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransferase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6872 PWY-6872] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6872 PWY-6872] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
** sterol_methyltransferase
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** retinoate biosynthesis I
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.41 EC-2.1.1.41]
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* Synonym(s):
 
* Synonym(s):
 +
** retinoic acid biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
** 1 [[CYCLOARTENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CPD-696]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-12581]]
* With common name(s):
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** 1 associated gene(s):
** 1 cycloartenol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 24-methylenecycloartanol[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_17086]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
* [[Tiso_gene_11850]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12548 RXN-12548]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12549 RXN-12549]
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12585 RXN-12585]
** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11849]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12590]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481]
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{{#set: common name=retinoate biosynthesis I}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=retinoic acid biosynthesis}}
{{#set: common name=sterol_methyltransferase}}
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{{#set: reaction found=1}}
{{#set: ec number=EC-2.1.1.41}}
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{{#set: total reaction=4}}
{{#set: gene associated=Tiso_gene_11850|Tiso_gene_11849|Tiso_gene_12590}}
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{{#set: completion rate=25.0}}
{{#set: in pathway=PWY-7155|PWY-2541}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:28, 18 March 2018

Pathway PWY-6872

  • taxonomic range:
  • common name:
    • retinoate biosynthesis I
  • Synonym(s):
    • retinoic acid biosynthesis

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links