Difference between revisions of "D-RIBULOSE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7279 CPD-7279] == * smiles: ** CC(C=CC12(C(CC(CC1(C)O2)O)(C)C))=CC=O * inchi key: ** InChIK...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF * ec...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7279 CPD-7279] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
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* smiles:
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* direction:
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** CC(C=CC12(C(CC(CC1(C)O2)O)(C)C))=CC=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZTALKMXOHWQNIA-HLJJCREZSA-N
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* common name:
 
* common name:
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** 2-cis,4-trans-xanthoxin
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** oxidoreductase
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* molecular weight:
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** ORF
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** 250.337   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
 
* Synonym(s):
 
* Synonym(s):
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** xanthoxin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-7973]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2354]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
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* [[RXN-7974]]
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* With common name(s):
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* [[RXN-698]]
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** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3898]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14345]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10972]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14344]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10971]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820570 91820570]
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{{#set: common name=oxidoreductase}}
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* CHEMSPIDER:
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{{#set: common name=ORF}}
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** [http://www.chemspider.com/Chemical-Structure.4445403.html 4445403]
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{{#set: ec number=EC-3.1.26.5}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_3898|Tiso_gene_14345|Tiso_gene_10972|Tiso_gene_14344|Tiso_gene_10971}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=32304 32304]
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{{#set: in pathway=PWY0-1479}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C13453 C13453]
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: smiles=CC(C=CC12(C(CC(CC1(C)O2)O)(C)C))=CC=O}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=ZTALKMXOHWQNIA-HLJJCREZSA-N}}
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{{#set: common name=2-cis,4-trans-xanthoxin}}
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{{#set: molecular weight=250.337    }}
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{{#set: common name=xanthoxin}}
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{{#set: produced by=RXN-7973|RXN-7974|RXN-698}}
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Revision as of 18:30, 18 March 2018

Reaction RXN0-6480

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • oxidoreductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a tRNA precursor with a 5' extension[c] => 1 an uncharged tRNA[c] + 1 a tRNA fragment[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=D-RIBULOSE&oldid=24835"