Difference between revisions of "Ribonucleoside-Monophosphates"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17832 RXN-17832] == * direction: ** LEFT-TO-RIGHT * common name: ** trypsin ** trypsin_family *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17832 RXN-17832] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** trypsin
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** guanosine deoxyribonucleotides de novo biosynthesis II
** trypsin_family
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.21.4 EC-3.4.21.4]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-19202]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19205]][c] '''+''' 1 [[CPD-19203]][c]
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* [[DGDPKIN-RXN]]
* With common name(s):
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** 6 associated gene(s):
** 1 L-4-hydroxyphenylglycine-L-arginyl-D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c] '''+''' 1 H2O[c] '''=>''' 1 L-4-hydroxyphenylglycine-L-arginine[c] '''+''' 1 D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c]
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*** [[Tiso_gene_9290]]
 
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*** [[Tiso_gene_16529]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_18224]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_195]]
* [[Tiso_gene_19324]]
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*** [[Tiso_gene_17272]]
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_17271]]
***AUTOMATED-NAME-MATCH
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** 7 reconstruction source(s) associated:
* [[Tiso_gene_4147]]
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*** [[annotation-experimental_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_12875]]
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*** [[orthology-athaliana]]
** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
***AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
* [[Tiso_gene_13074]]
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*** [[orthology-creinhardtii]]
** IN-SILICO_ANNOTATION
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* [[GDPREDUCT-RXN]]
***AUTOMATED-NAME-MATCH
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** 4 associated gene(s):
== Pathways  ==
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*** [[Tiso_gene_10138]]
* [[PWY-7797]], nocardicin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7797 PWY-7797]
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*** [[Tiso_gene_10617]]
** '''1''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_9916]]
== Reconstruction information  ==
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*** [[Tiso_gene_9915]]
* [[annotation]]:
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** 6 reconstruction source(s) associated:
** [[pathwaytools]]:
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*** [[annotation-experimental_annotation]]
*** [[in-silico_annotation]]
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*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN0-748]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_9916]]
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*** [[Tiso_gene_10617]]
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*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_10138]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-746 RXN0-746]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
{{#set: common name=trypsin}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7222 PWY-7222]
{{#set: common name=trypsin_family}}
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{{#set: taxonomic range=TAX-2}}
{{#set: ec number=EC-3.4.21.4}}
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{{#set: common name=guanosine deoxyribonucleotides de novo biosynthesis II}}
{{#set: gene associated=Tiso_gene_19324|Tiso_gene_4147|Tiso_gene_12875|Tiso_gene_13074}}
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{{#set: reaction found=3}}
{{#set: in pathway=PWY-7797}}
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{{#set: total reaction=4}}
{{#set: reconstruction category=annotation}}
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{{#set: completion rate=75.0}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:30, 18 March 2018

Pathway PWY-7222

  • taxonomic range:
  • common name:
    • guanosine deoxyribonucleotides de novo biosynthesis II
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links