Difference between revisions of "CPD-14276"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin_de-epoxidase **...")
(Created page with "Category:Gene == Gene Tiso_gene_14027 == * Synonym(s): == Reactions associated == * 3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN ** pantograph-athaliana ** pantog...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] ==
+
== Gene Tiso_gene_14027 ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
−
* common name:
+
−
** violaxanthin_de-epoxidase
+
−
** violaxanthin_de-_chloroplast
+
 
* Synonym(s):
 
* Synonym(s):
−
** VDE
 
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN]]
−
** 1 [[CPD1F-133]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASCORBATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
+
** [[pantograph]]-[[athaliana]]
−
* With common name(s):
+
** [[pantograph]]-[[esiliculosus]]
−
** 1 violaxanthin[c] '''+''' 1 H+[c] '''+''' 1 L-ascorbate[c] '''=>''' 1 H2O[c] '''+''' 1 antheraxanthin[c] '''+''' 1 L-dehydro-ascorbate[c]
+
** [[pantograph]]-[[creinhardtii]]
−
 
+
* [[HBCO_nadp]]
−
== Genes associated with this reaction  ==
+
** [[pantograph]]-[[creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[OHACYL-COA-DEHYDROG-RXN]]
−
* [[Tiso_gene_1275]]
+
** [[pantograph]]-[[esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* [[RXN-10698]]
−
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_16523]]
+
* [[RXN-10702]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[esiliculosus]]
−
***EC-NUMBER
+
* [[RXN-10703]]
−
* [[Tiso_gene_5666]]
+
** [[pantograph]]-[[esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* [[RXN-11245]]
−
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-11662]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12490]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12570]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12705]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-12750]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-14275]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN0-2044]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways ==
+
== Pathways associated ==
−
* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
+
* [[PWY-6920]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[P162-PWY]]
−
== Reconstruction information  ==
+
* [[PWY-5177]]
−
* [[orthology]]:
+
* [[PWY-6583]]
−
** [[pantograph]]:
+
* [[PWY-6883]]
−
*** [[esiliculosus]]
+
* [[PWY-5136]]
−
* [[annotation]]:
+
* [[PWY-7778]]
−
** [[pathwaytools]]:
+
* [[PWY-7779]]
−
*** [[in-silico_annotation]]
+
* [[PWY-7094]]
 +
* [[PWY66-391]]
 +
* [[PWY-5789]]
 +
* [[FAO-PWY]]
 +
* [[CENTFERM-PWY]]
 +
* [[PWY-6945]]
 +
* [[PWY0-321]]
 +
* [[PWY-7007]]
 +
* [[PWY-6435]]
 +
* [[PWY-7216]]
 +
* [[PWY-1361]]
 +
* [[PWY-6946]]
 +
* [[PWY-6944]]
 +
* [[PWY-735]]
 +
* [[PWY-7401]]
 +
* [[PWY-6863]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: reaction associated=3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN|HBCO_nadp|OHACYL-COA-DEHYDROG-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-12490|RXN-12570|RXN-12705|RXN-12750|RXN-14275|RXN0-2044}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15353 15353]
+
{{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|PWY-6883|PWY-5136|PWY-7778|PWY-7779|PWY-7094|PWY66-391|PWY-5789|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-7007|PWY-6435|PWY-7216|PWY-1361|PWY-6946|PWY-6944|PWY-735|PWY-7401|PWY-6863}}
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R07178 R07178]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=violaxanthin_de-epoxidase}}
+
−
{{#set: common name=violaxanthin_de-_chloroplast}}
+
−
{{#set: common name=VDE}}
+
−
{{#set: gene associated=Tiso_gene_1275|Tiso_gene_16523|Tiso_gene_5666}}
+
−
{{#set: in pathway=PWY-5945}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:32, 18 March 2018

Gene Tiso_gene_14027

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14276&oldid=25083"