Difference between revisions of "DOLICHOL-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** 6-ph...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEHYDRO-3-DEOXY-D-GLUCONATE 2-DEHYDRO-3-DEOXY-D-GLUCONATE] == * smiles: ** C(=O)([O-])C(=O)CC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEHYDRO-3-DEOXY-D-GLUCONATE 2-DEHYDRO-3-DEOXY-D-GLUCONATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)([O-])C(=O)CC(O)C(O)CO
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* inchi key:
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** InChIKey=WPAMZTWLKIDIOP-WVZVXSGGSA-M
 
* common name:
 
* common name:
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** ORF
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** 2-dehydro-3-deoxy-D-gluconate
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** 6-phosphogluconolactonase
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* molecular weight:
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* ec number:
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** 177.133   
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** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
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* Synonym(s):
 
* Synonym(s):
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** 2-keto-3-deoxy-D-gluconic acid
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** 2-keto-3-deoxy-D-gluconate
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** 3-deoxy-2-oxo-D-gluconate
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** 2-keto-3-deoxygluconate
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** 3-deoxy-D-erythro-hex-2-ulosonic acid
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** KDG
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-2961]][c]
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* [[MANNONDEHYDRAT-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate 6-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15950]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_8585]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10799]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20412]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5901]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 17510-99-5
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44229111 44229111]
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** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
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* HMDB : HMDB01353
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P63337 P63337]
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** [http://www.genome.jp/dbget-bin/www_bget?C00204 C00204]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57990 57990]
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{{#set: common name=6-phosphogluconolactonase}}
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* BIGG : 2ddglcn
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{{#set: ec number=EC-3.1.1.31}}
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{{#set: smiles=C(=O)([O-])C(=O)CC(O)C(O)CO}}
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{{#set: gene associated=Tiso_gene_15950|Tiso_gene_8585|Tiso_gene_10799|Tiso_gene_20412|Tiso_gene_5901}}
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{{#set: inchi key=InChIKey=WPAMZTWLKIDIOP-WVZVXSGGSA-M}}
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{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: common name=2-dehydro-3-deoxy-D-gluconate}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=177.133    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=2-keto-3-deoxy-D-gluconic acid|2-keto-3-deoxy-D-gluconate|3-deoxy-2-oxo-D-gluconate|2-keto-3-deoxygluconate|3-deoxy-D-erythro-hex-2-ulosonic acid|KDG}}
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: produced by=MANNONDEHYDRAT-RXN}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:32, 18 March 2018

Metabolite 2-DEHYDRO-3-DEOXY-D-GLUCONATE

  • smiles:
    • C(=O)([O-])C(=O)CC(O)C(O)CO
  • inchi key:
    • InChIKey=WPAMZTWLKIDIOP-WVZVXSGGSA-M
  • common name:
    • 2-dehydro-3-deoxy-D-gluconate
  • molecular weight:
    • 177.133
  • Synonym(s):
    • 2-keto-3-deoxy-D-gluconic acid
    • 2-keto-3-deoxy-D-gluconate
    • 3-deoxy-2-oxo-D-gluconate
    • 2-keto-3-deoxygluconate
    • 3-deoxy-D-erythro-hex-2-ulosonic acid
    • KDG

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 17510-99-5
  • PUBCHEM:
  • HMDB : HMDB01353
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : 2ddglcn
"C(=O)([O-])C(=O)CC(O)C(O)CO" cannot be used as a page name in this wiki.



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