Difference between revisions of "Tiso gene 20539"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** ferredoxin-dependent_g...")
(Created page with "Category:Gene == Gene Tiso_gene_6189 == * left end position: ** 4365 * transcription direction: ** POSITIVE * right end position: ** 5198 * centisome position: ** 35.04616...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
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== Gene Tiso_gene_6189 ==
* direction:
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* left end position:
** REVERSIBLE
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** 4365
* common name:
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* transcription direction:
** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
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** POSITIVE
** glutamate_synthase
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* right end position:
* ec number:
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** 5198
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
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* centisome position:
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** 35.046165   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[CYTOCHROME-B5-REDUCTASE-RXN]]
** 1 [[WATER]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 H2O[c] '''+''' 1 L-glutamate[c] '''+''' 1 NADP+[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 H+[c] '''+''' 1 ammonium[c] '''+''' 1 NADPH[c]
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* [[RXN-11195]]
 
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** in-silico_annotation
== Genes associated with this reaction  ==
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***ec-number
Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
* [[Tiso_gene_2581]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11511]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1154]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: left end position=4365}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: right end position=5198}}
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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{{#set: centisome position=35.046165    }}
* UNIPROT:
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{{#set: reaction associated=CYTOCHROME-B5-REDUCTASE-RXN|RXN-11195}}
** [http://www.uniprot.org/uniprot/P07262 P07262]
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** [http://www.uniprot.org/uniprot/P15111 P15111]
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** [http://www.uniprot.org/uniprot/P28724 P28724]
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** [http://www.uniprot.org/uniprot/P43793 P43793]
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** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
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** [http://www.uniprot.org/uniprot/P00370 P00370]
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** [http://www.uniprot.org/uniprot/P00369 P00369]
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** [http://www.uniprot.org/uniprot/P29507 P29507]
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** [http://www.uniprot.org/uniprot/P28998 P28998]
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** [http://www.uniprot.org/uniprot/P29051 P29051]
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** [http://www.uniprot.org/uniprot/P31026 P31026]
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** [http://www.uniprot.org/uniprot/P39475 P39475]
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** [http://www.uniprot.org/uniprot/P39708 P39708]
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** [http://www.uniprot.org/uniprot/P54387 P54387]
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** [http://www.uniprot.org/uniprot/P54386 P54386]
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** [http://www.uniprot.org/uniprot/P95544 P95544]
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** [http://www.uniprot.org/uniprot/P78804 P78804]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
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{{#set: common name=glutamate_synthase}}
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{{#set: ec number=EC-1.4.1.4}}
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{{#set: gene associated=Tiso_gene_2581|Tiso_gene_11511|Tiso_gene_1154}}
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{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:33, 18 March 2018

Gene Tiso_gene_6189

  • left end position:
    • 4365
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5198
  • centisome position:
    • 35.046165
  • Synonym(s):

Reactions associated

Pathways associated

External links