Difference between revisions of "ANTHRANSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1342 RXN0-1342] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionine_trna_r...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYCYTIDINE DEOXYCYTIDINE] == * smiles: ** C1(=CN(C(=O)N=C(N)1)C2(CC(O)C(CO)O2)) * inchi key:...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1342 RXN0-1342] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYCYTIDINE DEOXYCYTIDINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(=CN(C(=O)N=C(N)1)C2(CC(O)C(CO)O2))
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* inchi key:
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** InChIKey=CKTSBUTUHBMZGZ-SHYZEUOFSA-N
 
* common name:
 
* common name:
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** s-adenosylmethionine_trna_ribosyltransferase
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** 2'-deoxycytidine
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.99.17 EC-2.4.99.17]
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** 227.219   
 
* Synonym(s):
 
* Synonym(s):
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** d-cytidine
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** deoxycytidine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[DCYTPT]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[ADENINE]][c] '''+''' 1 [[tRNAs-containing-epoxy-quenosine]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c] '''=>''' 1 L-methionine[c] '''+''' 1 adenine[c] '''+''' 1 an epoxyqueuosine34 in tRNA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6037]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 951-77-9
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{{#set: common name=s-adenosylmethionine_trna_ribosyltransferase}}
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* METABOLIGHTS : MTBLC15698
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{{#set: ec number=EC-2.4.99.17}}
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* DRUGBANK : DB02594
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{{#set: gene associated=Tiso_gene_6037}}
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* PUBCHEM:
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{{#set: in pathway=PWY-6700}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=13711 13711]
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB00014
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{{#set: reconstruction tool=pathwaytools}}
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* LIGAND-CPD:
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{{#set: reconstruction source=in-silico_annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00881 C00881]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.13117.html 13117]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15698 15698]
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* BIGG : dcyt
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{{#set: smiles=C1(=CN(C(=O)N=C(N)1)C2(CC(O)C(CO)O2))}}
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{{#set: inchi key=InChIKey=CKTSBUTUHBMZGZ-SHYZEUOFSA-N}}
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{{#set: common name=2'-deoxycytidine}}
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{{#set: molecular weight=227.219    }}
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{{#set: common name=d-cytidine|deoxycytidine}}
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{{#set: consumed by=DCYTPT}}

Revision as of 18:33, 18 March 2018

Metabolite DEOXYCYTIDINE

  • smiles:
    • C1(=CN(C(=O)N=C(N)1)C2(CC(O)C(CO)O2))
  • inchi key:
    • InChIKey=CKTSBUTUHBMZGZ-SHYZEUOFSA-N
  • common name:
    • 2'-deoxycytidine
  • molecular weight:
    • 227.219
  • Synonym(s):
    • d-cytidine
    • deoxycytidine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 951-77-9
  • METABOLIGHTS : MTBLC15698
  • DRUGBANK : DB02594
  • PUBCHEM:
  • HMDB : HMDB00014
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : dcyt




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