Difference between revisions of "Tiso gene 3755"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
(Created page with "Category:Gene == Gene Tiso_gene_18263 == * left end position: ** 194 * transcription direction: ** POSITIVE * right end position: ** 2497 * centisome position: ** 6.192148...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
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== Gene Tiso_gene_18263 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 194
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* common name:
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* transcription direction:
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** lipoate-protein_ligase_a
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** POSITIVE
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** lipoate-protein_ligase
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* right end position:
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** 2497
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* centisome position:
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** 6.192148   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PHOSGLYPHOS-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[LIPOYL-AMP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H+[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 lipoyl-adenylate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-1042]]
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* [[Tiso_gene_4494]]
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* [[PWY-7003]]
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** IN-SILICO_ANNOTATION
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* [[SUCSYN-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[GLYCOLYSIS]]
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* [[Tiso_gene_17216]]
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* [[PWY-6901]]
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** IN-SILICO_ANNOTATION
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* [[P124-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-6886]]
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* [[Tiso_gene_17215]]
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* [[CALVIN-PWY]]
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** IN-SILICO_ANNOTATION
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* [[ANAGLYCOLYSIS-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[GLUCONEO-PWY]]
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* [[Tiso_gene_4493]]
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* [[P122-PWY]]
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** IN-SILICO_ANNOTATION
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* [[P185-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-5484]]
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* [[Tiso_gene_8713]]
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* [[PWY66-399]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=194}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2497}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
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{{#set: centisome position=6.192148    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: pathway associated=PWY-1042|PWY-7003|SUCSYN-PWY|GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|GLUCONEO-PWY|P122-PWY|P185-PWY|PWY-5484|PWY66-399}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: gene associated=Tiso_gene_4494|Tiso_gene_17216|Tiso_gene_17215|Tiso_gene_4493|Tiso_gene_8713}}
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{{#set: in pathway=PWY-6984|PWY0-522}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:35, 18 March 2018

Gene Tiso_gene_18263

  • left end position:
    • 194
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2497
  • centisome position:
    • 6.192148
  • Synonym(s):

Reactions associated

  • PHOSGLYPHOS-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3755&oldid=25522"