Difference between revisions of "AMETt2h"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacylglutathione_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXII-RXN GLYOXII-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** hydroxyacylglutathione_hydrolase
 +
** hydroxyacyl_glutathione_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2]
+
** [http://enzyme.expasy.org/EC/3.1.2.6 EC-3.1.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SEPO3]][c] '''=>''' 1 [[Charged-SEC-tRNAs]][c] '''+''' 2 [[Pi]][c]
+
** 1 [[S-LACTOYL-GLUTATHIONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[D-LACTATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an O-phospho-L-seryl-[tRNASec][c] '''+''' 1 H2O[c] '''+''' 1 selenophosphate[c] '''=>''' 1 an L-selenocysteinyl-[tRNAsec][c] '''+''' 2 phosphate[c]
+
** 1 (R)-S-lactoylglutathione[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 glutathione[c] '''+''' 1 (R)-lactate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16385]]
+
* [[Tiso_gene_19886]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_12304]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_10894]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5281]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10895]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
+
* [[PWY-5386]], methylglyoxal degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-synechocystis]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25245 25245]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01736 R01736]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9UZT9 Q9UZT9]
 +
** [http://www.uniprot.org/uniprot/P0AC84 P0AC84]
 +
** [http://www.uniprot.org/uniprot/Q9JWC6 Q9JWC6]
 +
** [http://www.uniprot.org/uniprot/O35952 O35952]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.9.1.2}}
+
{{#set: common name=hydroxyacylglutathione_hydrolase}}
−
{{#set: gene associated=Tiso_gene_16385}}
+
{{#set: common name=hydroxyacyl_glutathione_hydrolase}}
−
{{#set: in pathway=PWY-6281}}
+
{{#set: ec number=EC-3.1.2.6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_19886|Tiso_gene_12304|Tiso_gene_10894|Tiso_gene_5281|Tiso_gene_10895}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-5386}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 19:36, 18 March 2018

Reaction GLYOXII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacylglutathione_hydrolase
    • hydroxyacyl_glutathione_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5386, methylglyoxal degradation I: PWY-5386
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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