Difference between revisions of "Tiso gene 2841"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphatidylinositol-4-kinase
+
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
−
** phosphatidylinositol_kinase
+
−
** phosphatidylinositol_4-kinase_beta
+
 
** ORF
 
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.67 EC-2.7.1.67]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-1108]][c]
+
** 1 [[C1]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c]
+
** 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''=>''' 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2572]]
+
* [[Tiso_gene_1604]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17240]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12389]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17238]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18529]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18530]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17239]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
+
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDOGLYCANSYN-PWY PEPTIDOGLYCANSYN-PWY]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19877 19877]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28386 28386]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18688 P18688]
+
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
−
** [http://www.uniprot.org/uniprot/P12798 P12798]
+
** [http://www.uniprot.org/uniprot/P45062 P45062]
−
** [http://www.uniprot.org/uniprot/P39104 P39104]
+
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
−
** [http://www.uniprot.org/uniprot/P42356 P42356]
+
** [http://www.uniprot.org/uniprot/O25235 O25235]
−
** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
+
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
−
** [http://www.uniprot.org/uniprot/P37297 P37297]
+
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
−
** [http://www.uniprot.org/uniprot/Q28925 Q28925]
+
** [http://www.uniprot.org/uniprot/P37585 P37585]
−
** [http://www.uniprot.org/uniprot/O81281 O81281]
+
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
−
** [http://www.uniprot.org/uniprot/O81129 O81129]
+
−
** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphatidylinositol-4-kinase}}
+
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase}}
−
{{#set: common name=phosphatidylinositol_kinase}}
+
−
{{#set: common name=phosphatidylinositol_4-kinase_beta}}
+
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.7.1.67}}
+
{{#set: ec number=EC-2.7.8.13}}
−
{{#set: gene associated=Tiso_gene_2572|Tiso_gene_17240|Tiso_gene_12389|Tiso_gene_17238|Tiso_gene_18529|Tiso_gene_18530|Tiso_gene_17239}}
+
{{#set: gene associated=Tiso_gene_1604}}
−
{{#set: in pathway=PWY-6352|PWY-6351}}
+
{{#set: in pathway=PEPTIDOGLYCANSYN-PWY}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 19:36, 18 March 2018

Reaction PHOSNACMURPENTATRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1 di-trans,octa-cis-undecaprenyl phosphate[c] => 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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