Difference between revisions of "Non-Glycosylated-sugar-Acceptors"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] == * common name: ** a [protein]-3-O-(&bet...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14268 RXN-14268] == * direction: ** LEFT-TO-RIGHT * common name: ** lauroyl-CoA acetyl-CoA acyl...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14268 RXN-14268] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine
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** lauroyl-CoA acetyl-CoA acyltransferase
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** thiolase
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** acetyl-_c-acetyltransferase
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** 3-ketoacyl-_thiolase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
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** 3-β-D-glucosyluronate-3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]
 
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** β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]
 
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** β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]
 
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** a [protein]-3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.4.1.223-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-10284]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[LAUROYLCOA-CPD]][c]
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* [[2.4.1.135-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 coenzyme A[c] '''+''' 1 3-oxo-myristoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 lauroyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16181]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine}}
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* RHEA:
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{{#set: common name=3-β-D-glucosyluronate-3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]|β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]|β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]|a [protein]-3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31093 31093]
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{{#set: consumed by=2.4.1.223-RXN}}
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* LIGAND-RXN:
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{{#set: produced by=2.4.1.135-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03858 R03858]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lauroyl-CoA acetyl-CoA acyltransferase}}
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{{#set: common name=thiolase}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3855|Tiso_gene_16181}}
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{{#set: in pathway=PWY-7654}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:38, 18 March 2018

Reaction RXN-14268

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lauroyl-CoA acetyl-CoA acyltransferase
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 3-oxo-myristoyl-CoA[c] => 1 acetyl-CoA[c] + 1 lauroyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links






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