Difference between revisions of "RXN-8228"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** protoporphyrinogen IX oxidase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** protoporphyrinogen IX oxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7088]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-7090]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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** 3.0 [[OXYGEN-MOLECULE]][h] '''+''' 1.0 [[PROTOPORPHYRINOGEN]][h] '''=>''' 3.0 [[HYDROGEN-PEROXIDE]][h] '''+''' 1.0 [[PROTOPORPHYRIN_IX]][h]
 
* With common name(s):
 
* With common name(s):
** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 (2R,3S,4S)-leucodelphinidin[c] '''=>''' 2 H2O[c] '''+''' 1 delphinidin[c] '''+''' 1 H+[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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** 3.0 oxygen[h] '''+''' 1.0 protoporphyrinogen IX[h] '''=>''' 3.0 hydrogen peroxide[h] '''+''' 1.0 protoporphyrin IX[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_3330]]
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* [[Tiso_gene_15401]]
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5153]], anthocyanin biosynthesis (delphinidin 3-O-glucoside): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5153 PWY-5153]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-creinhardtii]]
*** [[esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05037 R05037]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-1.14.11}}
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{{#set: common name=protoporphyrinogen IX oxidase}}
{{#set: gene associated=Tiso_gene_3330}}
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{{#set: gene associated=Tiso_gene_15401}}
{{#set: in pathway=PWY-5153}}
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{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=esiliculosus}}
 

Revision as of 19:38, 18 March 2018

Reaction PPPGO

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protoporphyrinogen IX oxidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links