Difference between revisions of "OH-PYR"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
(Created page with "Category:Gene == Gene Tiso_gene_8950 == * left end position: ** 126 * transcription direction: ** POSITIVE * right end position: ** 941 * centisome position: ** 1.2932363...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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== Gene Tiso_gene_8950 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 126
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* common name:
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* transcription direction:
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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** POSITIVE
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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* right end position:
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* ec number:
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** 941
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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* centisome position:
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** 1.2932363   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ADEC]]
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c]
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** [[pantograph]]-[[creinhardtii]]
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* With common name(s):
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* [[ADENYLATECYC-RXN]]
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATPASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_3260]]
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* [[GUANYLCYC-RXN]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18084]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[orthology]]:
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** [[pantograph]]:
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** in-silico_annotation
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*** [[esiliculosus]]
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***ec-number
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* [[annotation]]:
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* [[RXN-12195]]
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** [[pathwaytools]]:
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** in-silico_annotation
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*** [[experimental_annotation]]
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***ec-number
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*** [[in-silico_annotation]]
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* [[RXN-12196]]
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** in-silico_annotation
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***ec-number
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* [[RXN0-5462]]
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** in-silico_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=126}}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: right end position=941}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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{{#set: centisome position=1.2932363    }}
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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{{#set: reaction associated=ADEC|ADENYLATECYC-RXN|ATPASE-RXN|GUANYLCYC-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_3260|Tiso_gene_18084}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:38, 18 March 2018

Gene Tiso_gene_8950

  • left end position:
    • 126
  • transcription direction:
    • POSITIVE
  • right end position:
    • 941
  • centisome position:
    • 1.2932363
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=OH-PYR&oldid=25862"