Difference between revisions of "ACOA140or"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOHMETRANS-RXN GLYOHMETRANS-RXN] == * direction: ** REVERSIBLE * common name: ** serine_hydroxyme...")
(Created page with "Category:Gene == Gene Tiso_gene_20057 == * Synonym(s): == Reactions associated == * DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN ** pantograph-esiliculosus * RXN-12...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOHMETRANS-RXN GLYOHMETRANS-RXN] ==
+
== Gene Tiso_gene_20057 ==
−
* direction:
+
−
** REVERSIBLE
+
−
* common name:
+
−
** serine_hydroxymethyltransferase
+
−
** serine_cytosolic-like_isoform_1
+
−
** serine_hydroxymethyltransferase_mitochondrial
+
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.2.1 EC-2.1.2.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
−
** 1 [[SER]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c]
+
−
* With common name(s):
+
−
** 1 L-serine[c] '''+''' 1 a tetrahydrofolate[c] '''<=>''' 1 glycine[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H2O[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_16154]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7776]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16153]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18652]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways  ==
+
* [[RXN-12547]]
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
+
** [[pantograph]]-[[creinhardtii]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
== Pathways associated ==
−
* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
+
* [[TRIGLSYN-PWY]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-3661]], glycine betaine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
−
* [[GLYSYN-PWY]], glycine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-PWY GLYSYN-PWY]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
+
−
** '''7''' reactions found over '''24''' reactions in the full pathway
+
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
+
−
** '''7''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: reaction associated=DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN|RXN-12547}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15481 15481]
+
{{#set: pathway associated=TRIGLSYN-PWY}}
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00945 R00945]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P35623 P35623]
+
−
** [http://www.uniprot.org/uniprot/P34898 P34898]
+
−
** [http://www.uniprot.org/uniprot/P34899 P34899]
+
−
** [http://www.uniprot.org/uniprot/P34896 P34896]
+
−
** [http://www.uniprot.org/uniprot/Q9CHW7 Q9CHW7]
+
−
** [http://www.uniprot.org/uniprot/P34897 P34897]
+
−
** [http://www.uniprot.org/uniprot/P0A2E1 P0A2E1]
+
−
** [http://www.uniprot.org/uniprot/O23254 O23254]
+
−
** [http://www.uniprot.org/uniprot/O53441 O53441]
+
−
** [http://www.uniprot.org/uniprot/O08370 O08370]
+
−
** [http://www.uniprot.org/uniprot/P43844 P43844]
+
−
** [http://www.uniprot.org/uniprot/Q58992 Q58992]
+
−
** [http://www.uniprot.org/uniprot/O66776 O66776]
+
−
** [http://www.uniprot.org/uniprot/Q9XAY7 Q9XAY7]
+
−
** [http://www.uniprot.org/uniprot/P47634 P47634]
+
−
** [http://www.uniprot.org/uniprot/Q9WZH9 Q9WZH9]
+
−
** [http://www.uniprot.org/uniprot/P56089 P56089]
+
−
** [http://www.uniprot.org/uniprot/O53615 O53615]
+
−
** [http://www.uniprot.org/uniprot/O83349 O83349]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMP7 Q9ZMP7]
+
−
** [http://www.uniprot.org/uniprot/O51547 O51547]
+
−
** [http://www.uniprot.org/uniprot/O84439 O84439]
+
−
** [http://www.uniprot.org/uniprot/P24531 P24531]
+
−
** [http://www.uniprot.org/uniprot/P39148 P39148]
+
−
** [http://www.uniprot.org/uniprot/P24060 P24060]
+
−
** [http://www.uniprot.org/uniprot/P37292 P37292]
+
−
** [http://www.uniprot.org/uniprot/P34895 P34895]
+
−
** [http://www.uniprot.org/uniprot/P34894 P34894]
+
−
** [http://www.uniprot.org/uniprot/P49357 P49357]
+
−
** [http://www.uniprot.org/uniprot/P49358 P49358]
+
−
** [http://www.uniprot.org/uniprot/P50433 P50433]
+
−
** [http://www.uniprot.org/uniprot/P37291 P37291]
+
−
** [http://www.uniprot.org/uniprot/P78011 P78011]
+
−
** [http://www.uniprot.org/uniprot/P77962 P77962]
+
−
** [http://www.uniprot.org/uniprot/Q9SVM4 Q9SVM4]
+
−
** [http://www.uniprot.org/uniprot/Q9SUU0 Q9SUU0]
+
−
** [http://www.uniprot.org/uniprot/Q9SZJ5 Q9SZJ5]
+
−
** [http://www.uniprot.org/uniprot/O23984 O23984]
+
−
** [http://www.uniprot.org/uniprot/P0A825 P0A825]
+
−
** [http://www.uniprot.org/uniprot/P07511 P07511]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=serine_hydroxymethyltransferase}}
+
−
{{#set: common name=serine_cytosolic-like_isoform_1}}
+
−
{{#set: common name=serine_hydroxymethyltransferase_mitochondrial}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-2.1.2.1}}
+
−
{{#set: gene associated=Tiso_gene_16154|Tiso_gene_7776|Tiso_gene_16153|Tiso_gene_18652}}
+
−
{{#set: in pathway=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 19:43, 18 March 2018

Gene Tiso_gene_20057

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACOA140or&oldid=26326"