Difference between revisions of "UDPNACETYLMURAMATEDEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18302 RXN-18302] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18302 RXN-18302] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** caffeate_o-methyltransferase
+
** digalactosyldiacylglycerol_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
+
** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-676]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULIC-ACID]][c]
+
** 1 [[CPD-14553]][c] '''+''' 1 [[A-GALACTOSYLCERAMIDE]][c] '''=>''' 1 [[Digalactosylceramides]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-caffeate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 ferulate[c]
+
** 1 UDP-α-D-galactose[c] '''+''' 1 a β-D-galactosyl-N-acylsphingosine[c] '''=>''' 1 a digalactosylceramide[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18257]]
+
* [[Tiso_gene_11479]]
−
** [[pantograph]]-[[esiliculosus]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[Tiso_gene_18971]]
+
***EC-NUMBER
 +
* [[Tiso_gene_106]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_2142]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
+
* [[PWY-7840]], gala-series glycosphingolipids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
+
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
−
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
+
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7186 PWY-7186]
+
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20225 20225]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q41086 Q41086]
 
−
** [http://www.uniprot.org/uniprot/P28002 P28002]
 
−
** [http://www.uniprot.org/uniprot/Q00763 Q00763]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=caffeate_o-methyltransferase}}
+
{{#set: common name=digalactosyldiacylglycerol_synthase}}
−
{{#set: ec number=EC-2.1.1.68}}
+
{{#set: ec number=EC-2.4.1.241}}
−
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
+
{{#set: gene associated=Tiso_gene_11479|Tiso_gene_106|Tiso_gene_2142}}
−
{{#set: in pathway=PWY-2181|PWY-1121|PWY-7498|PWY-7186}}
+
{{#set: in pathway=PWY-7840}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 18:43, 18 March 2018

Reaction RXN-18302

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • digalactosyldiacylglycerol_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7840, gala-series glycosphingolipids biosynthesis: PWY-7840
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=UDPNACETYLMURAMATEDEHYDROG-RXN&oldid=26354"