Difference between revisions of "Tiso gene 15692"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** carbonic_anhyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** carbonic_anhydrase
+
−
** ORF
+
−
** beta-type_carbonic_anhydrase
+
−
** gamma_carbonic_anhydrase
+
−
** alpha_ca
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
** [http://enzyme.expasy.org/EC/2.7.7.13 EC-2.7.7.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[H2CO3]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[MANNOSE-1P]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GDP-MANNOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 carbonic acid[c] '''<=>''' 1 H2O[c] '''+''' 1 CO2[c]
+
** 1 &alpha;-D-mannose 1-phosphate[c] '''+''' 1 GTP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 GDP-&alpha;-D-mannose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18927]]
+
* [[Tiso_gene_14704]]
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[synechocystis]]
−
* [[Tiso_gene_7660]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_19413]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1600]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_9852]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17511]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3056]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19414]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_6150]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_20230]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15229 15229]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00885 R00885]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07450 P07450]
+
** [http://www.uniprot.org/uniprot/Q9TRF4 Q9TRF4]
−
** [http://www.uniprot.org/uniprot/P07452 P07452]
+
** [http://www.uniprot.org/uniprot/Q59427 Q59427]
−
** [http://www.uniprot.org/uniprot/P13634 P13634]
+
** [http://www.uniprot.org/uniprot/P41940 P41940]
−
** [http://www.uniprot.org/uniprot/P08060 P08060]
+
** [http://www.uniprot.org/uniprot/O22287 O22287]
−
** [http://www.uniprot.org/uniprot/P16016 P16016]
+
** [http://www.uniprot.org/uniprot/O74484 O74484]
−
** [http://www.uniprot.org/uniprot/P20507 P20507]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P16015 P16015]
+
{{#set: ec number=EC-2.7.7.13}}
−
** [http://www.uniprot.org/uniprot/P40881 P40881]
+
{{#set: gene associated=Tiso_gene_14704}}
−
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
+
{{#set: in pathway=PWY-5659|PWY-882}}
−
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
+
−
** [http://www.uniprot.org/uniprot/P00921 P00921]
+
−
** [http://www.uniprot.org/uniprot/P00917 P00917]
+
−
** [http://www.uniprot.org/uniprot/P00915 P00915]
+
−
** [http://www.uniprot.org/uniprot/P00918 P00918]
+
−
** [http://www.uniprot.org/uniprot/P07451 P07451]
+
−
** [http://www.uniprot.org/uniprot/P22748 P22748]
+
−
** [http://www.uniprot.org/uniprot/P35218 P35218]
+
−
** [http://www.uniprot.org/uniprot/P43166 P43166]
+
−
** [http://www.uniprot.org/uniprot/P00916 P00916]
+
−
** [http://www.uniprot.org/uniprot/P00920 P00920]
+
−
** [http://www.uniprot.org/uniprot/P00922 P00922]
+
−
** [http://www.uniprot.org/uniprot/O24855 O24855]
+
−
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
+
−
** [http://www.uniprot.org/uniprot/P14141 P14141]
+
−
** [http://www.uniprot.org/uniprot/P43165 P43165]
+
−
** [http://www.uniprot.org/uniprot/P07630 P07630]
+
−
** [http://www.uniprot.org/uniprot/P27139 P27139]
+
−
** [http://www.uniprot.org/uniprot/P35219 P35219]
+
−
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
+
−
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
+
−
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
+
−
** [http://www.uniprot.org/uniprot/P18761 P18761]
+
−
** [http://www.uniprot.org/uniprot/P17067 P17067]
+
−
** [http://www.uniprot.org/uniprot/P23589 P23589]
+
−
** [http://www.uniprot.org/uniprot/P24258 P24258]
+
−
** [http://www.uniprot.org/uniprot/P27140 P27140]
+
−
** [http://www.uniprot.org/uniprot/P27134 P27134]
+
−
** [http://www.uniprot.org/uniprot/P46510 P46510]
+
−
** [http://www.uniprot.org/uniprot/P46511 P46511]
+
−
** [http://www.uniprot.org/uniprot/P46512 P46512]
+
−
** [http://www.uniprot.org/uniprot/P46281 P46281]
+
−
** [http://www.uniprot.org/uniprot/P18915 P18915]
+
−
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
+
−
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
+
−
** [http://www.uniprot.org/uniprot/P27141 P27141]
+
−
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
+
−
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
+
−
** [http://www.uniprot.org/uniprot/P40880 P40880]
+
−
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
+
−
** [http://www.uniprot.org/uniprot/P93108 P93108]
+
−
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
+
−
** [http://www.uniprot.org/uniprot/O04855 O04855]
+
−
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
+
−
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
+
−
** [http://www.uniprot.org/uniprot/P46513 P46513]
+
−
** [http://www.uniprot.org/uniprot/O04846 O04846]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=carbonic_anhydrase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=beta-type_carbonic_anhydrase}}
+
−
{{#set: common name=gamma_carbonic_anhydrase}}
+
−
{{#set: common name=alpha_ca}}
+
−
{{#set: ec number=EC-4.2.1.1}}
+
−
{{#set: gene associated=Tiso_gene_18927|Tiso_gene_7660|Tiso_gene_19413|Tiso_gene_1600|Tiso_gene_9852|Tiso_gene_17511|Tiso_gene_3056|Tiso_gene_19414|Tiso_gene_6150|Tiso_gene_20230}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:45, 18 March 2018

Reaction 2.7.7.13-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-mannose 1-phosphate[c] + 1 GTP[c] + 1 H+[c] => 1 diphosphate[c] + 1 GDP-α-D-mannose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5659, GDP-mannose biosynthesis: PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15692&oldid=26568"