Difference between revisions of "Tiso gene 2505"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] == * direction: ** LEFT-TO-RIGHT * common name: ** cytidylate_kinase ** ump-cmp_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** cytidylate_kinase
 +
** ump-cmp_kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
 +
** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
 +
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SPERMIDINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-14378]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[DCMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 spermidine[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 dehydrospermidine[c] '''+''' 1 H+[c]
+
** 1 dCMP[c] '''+''' 1 ATP[c] '''=>''' 1 dCDP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_9739]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2386]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14116]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_19734]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
+
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19908 19908]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25094 25094]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-5905}}
+
{{#set: common name=cytidylate_kinase}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=ump-cmp_kinase}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec number=EC-2.7.4.25}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: ec number=EC-2.7.4.14}}
 +
{{#set: ec number=EC-2.7.4.13}}
 +
{{#set: gene associated=Tiso_gene_9739|Tiso_gene_2386|Tiso_gene_14116|Tiso_gene_19734}}
 +
{{#set: in pathway=PWY-7197}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:45, 18 March 2018

Reaction RXN-7913

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCMP[c] + 1 ATP[c] => 1 dCDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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