Difference between revisions of "Tiso gene 4092"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7974 RXN-7974] == * direction: ** LEFT-TO-RIGHT * common name: ** 9-cis-epoxycarotenoid_dioxyge...")
(Created page with "Category:Gene == Gene Tiso_gene_8389 == * left end position: ** 5812 * transcription direction: ** NEGATIVE * right end position: ** 8885 * centisome position: ** 56.43814...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7974 RXN-7974] ==
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== Gene Tiso_gene_8389 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5812
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* common name:
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* transcription direction:
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** 9-cis-epoxycarotenoid_dioxygenase
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** NEGATIVE
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** 9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein
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* right end position:
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* ec number:
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** 8885
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** [http://enzyme.expasy.org/EC/1.13.11.51 EC-1.13.11.51]
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* centisome position:
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** 56.43814   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GSHTRAN-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7196]][c] '''=>''' 1 [[CPD-7279]][c] '''+''' 1 [[CPD-7280]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 oxygen[c] '''+''' 1 9-cis-violaxanthin[c] '''=>''' 1 2-cis,4-trans-xanthoxin[c] '''+''' 1 (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[GST-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_7740]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_4653]]
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* [[RXN-13673]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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== Pathways ==
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** experimental_annotation
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== Reconstruction information  ==
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***ec-number
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* [[annotation]]:
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* [[RXN-15680]]
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** [[pathwaytools]]:
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** in-silico_annotation
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*** [[in-silico_annotation]]
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7112]]
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* [[PWY-6842]]
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* [[PWY-4061]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5812}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16541 16541]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=8885}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06953 R06953]
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{{#set: centisome position=56.43814    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: common name=9-cis-epoxycarotenoid_dioxygenase}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: common name=9-cis-epoxycarotenoid_neoxanthin_cleavage_enzyme-like_protein}}
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{{#set: ec number=EC-1.13.11.51}}
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{{#set: gene associated=Tiso_gene_7740|Tiso_gene_4653}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:45, 18 March 2018

Gene Tiso_gene_8389

  • left end position:
    • 5812
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 8885
  • centisome position:
    • 56.43814
  • Synonym(s):

Reactions associated

  • GSHTRAN-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • GST-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-13673
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-15680
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4092&oldid=26597"