Difference between revisions of "RIBULOKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11302 RXN-11302] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidoglycan transpeptidas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17893 RXN-17893] == * direction: ** LEFT-TO-RIGHT * common name: ** acylamino-acid-releasing_en...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11302 RXN-11302] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17893 RXN-17893] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** peptidoglycan transpeptidase (Gram-negative bacteria)
+
** acylamino-acid-releasing_enzyme
** beta-lactamase
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
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** [http://enzyme.expasy.org/EC/3.4.19.1 EC-3.4.19.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2 [[CPD-12231]][c] '''=>''' 1 [[CPD-12261]][c] '''+''' 1 [[D-ALANINE]][c]
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** 1 [[N-Ac-L-methionyl-L-glutaminyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Glutaminyl-Peptides]][c] '''+''' 1 [[CPD0-2015]][c]
 
* With common name(s):
 
* With common name(s):
** 2 a peptidoglycan dimer (meso-diaminopimelate containing)[c] '''=>''' 1 a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)[c] '''+''' 1 D-alanine[c]
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** 1 an N-terminal Nα-acetyl-L-methionyl-L-glutaminyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 an N-terminal L-glutaminyl-[protein][c] '''+''' 1 Nα-acetyl-L-methionine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_18870]]
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* [[Tiso_gene_3550]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
***EC-NUMBER
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***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7799 PWY-7799]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[annotation]]
** [[pathwaytools]]:
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** Source: [[annotation-in-silico_annotation]]
*** [[in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=peptidoglycan transpeptidase (Gram-negative bacteria)}}
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{{#set: common name=acylamino-acid-releasing_enzyme}}
{{#set: common name=beta-lactamase}}
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{{#set: ec number=EC-3.4.19.1}}
{{#set: ec number=EC-3.4.16.4}}
+
{{#set: gene associated=Tiso_gene_3550}}
{{#set: gene associated=Tiso_gene_18870}}
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{{#set: in pathway=PWY-7799}}
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 19:46, 18 March 2018

Reaction RXN-17893

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acylamino-acid-releasing_enzyme
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7799, Arg/N-end rule pathway (eukaryotic): PWY-7799
    • 8 reactions found over 14 reactions in the full pathway

Reconstruction information

External links