Difference between revisions of "CPD-592"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11382 RXN-11382] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** glutarate-semialdehyde_dehydrogenase | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.2.1.24 EC-1.2.1.24] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[SUCC-S-ALD]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 succinate semialdehyde[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 2 H+[c] '''+''' 1 succinate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_777]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[Tiso_gene_91]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | * [[Tiso_gene_6952]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-6473]], 4-aminobutanoate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6473 PWY-6473] |
− | ** '''1''' reactions found over '''6''' reactions in the full pathway | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
+ | * [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * Category: [[orthology]] |
− | ** [[ | + | ** Source: [[orthology-creinhardtii]] |
− | *** [[in-silico_annotation]] | + | *** Tool: [[pantograph]] |
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13217 13217] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P51649 P51649] | ||
+ | ** [http://www.uniprot.org/uniprot/P51650 P51650] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: ec number=EC-1. | + | {{#set: common name=glutarate-semialdehyde_dehydrogenase}} |
− | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-1.2.1.24}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: gene associated=Tiso_gene_777|Tiso_gene_91|Tiso_gene_6952}} |
− | {{#set: reconstruction | + | {{#set: in pathway=PWY-6473|PWY-6535|GLUDEG-I-PWY|PWY-4321}} |
− | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:48, 18 March 2018
Contents
Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- glutarate-semialdehyde_dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 succinate semialdehyde[c] + 1 NAD+[c] + 1 H2O[c] => 1 NADH[c] + 2 H+[c] + 1 succinate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_777
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_91
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_6952
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
Pathways
- PWY-6473, 4-aminobutanoate degradation IV: PWY-6473
- 1 reactions found over 2 reactions in the full pathway
- PWY-6535, 4-aminobutanoate degradation I: PWY-6535
- 2 reactions found over 2 reactions in the full pathway
- GLUDEG-I-PWY, GABA shunt: GLUDEG-I-PWY
- 4 reactions found over 6 reactions in the full pathway
- PWY-4321, L-glutamate degradation IV: PWY-4321
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links