Difference between revisions of "3-INDOLYLGLYCOLALDEHYDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_c...")
(Created page with "Category:Gene == Gene Tiso_gene_8461 == * left end position: ** 1154 * transcription direction: ** NEGATIVE * right end position: ** 5172 * centisome position: ** 11.30153...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
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== Gene Tiso_gene_8461 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 1154
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* common name:
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* transcription direction:
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** bifunctional_chorismate_mutase_prephenate_dehydratase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.4.99.5 EC-5.4.99.5]
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** 5172
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* centisome position:
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** 11.3015375   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 chorismate[c] '''<=>''' 1 prephenate[c]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12195]]
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* [[Tiso_gene_5940]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12196]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN0-5462]]
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== Pathways  ==
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** in-silico_annotation
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* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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***ec-number
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
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* [[PWY-7184]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7198]]
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* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
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* [[PWY-6545]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7210]]
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* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
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** '''1''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1154}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5172}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
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{{#set: centisome position=11.3015375    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P19080 P19080]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P27603 P27603]
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** [http://www.uniprot.org/uniprot/P32178 P32178]
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** [http://www.uniprot.org/uniprot/P43900 P43900]
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** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
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** [http://www.uniprot.org/uniprot/P21204 P21204]
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** [http://www.uniprot.org/uniprot/Q58029 Q58029]
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** [http://www.uniprot.org/uniprot/Q57696 Q57696]
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** [http://www.uniprot.org/uniprot/P43902 P43902]
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** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
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** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
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** [http://www.uniprot.org/uniprot/P07023 P07023]
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** [http://www.uniprot.org/uniprot/Q02286 Q02286]
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** [http://www.uniprot.org/uniprot/Q02287 Q02287]
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** [http://www.uniprot.org/uniprot/P42738 P42738]
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** [http://www.uniprot.org/uniprot/O22409 O22409]
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** [http://www.uniprot.org/uniprot/O22410 O22410]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
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{{#set: ec number=EC-5.4.99.5}}
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{{#set: gene associated=Tiso_gene_5940}}
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{{#set: in pathway=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|TYRSYN|PWY-6627}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:48, 18 March 2018

Gene Tiso_gene_8461

  • left end position:
    • 1154
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5172
  • centisome position:
    • 11.3015375
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-INDOLYLGLYCOLALDEHYDE&oldid=26987"