Difference between revisions of "Histone-Acetyl-Lysine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ADIPATE-DEHYDROG-RXN 2-KETO-ADIPATE-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R04560 R04560] == * direction: ** LEFT-TO-RIGHT * common name: ** R543 * Synonym(s): == Reaction F...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-ADIPATE-DEHYDROG-RXN 2-KETO-ADIPATE-DEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R04560 R04560] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** R543
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[2K-ADIPATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[NADH]][c]
+
** 1.0 [[10-FORMYL-THF]][c] '''+''' 1.0 [[AICAR]][c] '''=>''' 1.0 [[THF]][c] '''+''' 1.0 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 2-oxoadipate[c] '''=>''' 1 CO2[c] '''+''' 1 glutaryl-CoA[c] '''+''' 1 NADH[c]
+
** 1.0 10-formyl-tetrahydrofolate mono-L-glutamate[c] '''+''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''=>''' 1.0 tetrahydropteroyl mono-L-glutamate[c] '''+''' 1.0 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10209]]
+
* [[Tiso_gene_18420]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[synechocystis]]
−
* [[Tiso_gene_9330]]
+
−
** [[pantograph]]-[[athaliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5652 PWY-5652]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30795 30795]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Tiso_gene_10209|Tiso_gene_9330}}
+
{{#set: common name=R543}}
−
{{#set: in pathway=PWY-5652|PWY66-425|LYSINE-DEG1-PWY}}
+
{{#set: gene associated=Tiso_gene_18420}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 18:49, 18 March 2018

Reaction R04560

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • R543
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 10-formyl-tetrahydrofolate mono-L-glutamate[c] + 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] => 1.0 tetrahydropteroyl mono-L-glutamate[c] + 1.0 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Histone-Acetyl-Lysine&oldid=27126"