Difference between revisions of "NITRATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIKIN-RXN CYTIKIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMDH IMDH] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydrogenase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIKIN-RXN CYTIKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMDH IMDH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/2.7.1.213 EC-2.7.1.213]
+
** 3-isopropylmalate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ATP]][c] '''+''' 1 [[CYTIDINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1.0 [[NAD]][c] '''+''' 1.0 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''=>''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[CPD-7100]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ATP[c] '''+''' 1 cytidine[c] '''=>''' 1 ADP[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
+
** 1.0 NAD+[c] '''+''' 1.0 (2R,3S)-3-isopropylmalate[c] '''=>''' 1.0 NADH[c] '''+''' 1.0 H+[c] '''+''' 1.0 (2S)-2-isopropyl-3-oxosuccinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_2920]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
 
** '''3''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[orthology]]
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24674 24674]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00513 R00513]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.7.1.213}}
+
{{#set: common name=3-isopropylmalate dehydrogenase}}
{{#set: in pathway=PWY-5532|PWY-7193}}
+
{{#set: gene associated=Tiso_gene_2920}}
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:49, 18 March 2018

Reaction IMDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links