Difference between revisions of "Tiso gene 4822"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Cysteine-Desulfurase-L-cysteine Cysteine-Desulfurase-L-cysteine] == * common name: ** an [L-cys...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_re...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Cysteine-Desulfurase-L-cysteine Cysteine-Desulfurase-L-cysteine] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** an [L-cysteine desulfurase]-L-cysteine
+
** geranylgeranyl_diphosphate_reductase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN0-308]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7004]][c] '''=>''' 1 [[CPD-7006]][c] '''+''' 1 [[NADP]][c]
−
* [[RXN-14382]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 dihydrogeranylgeranyl chlorophyll a[c] '''=>''' 1 tetrahydrogeranylgeranyl chlorophyll a[c] '''+''' 1 NADP+[c]
−
* [[RXN-12587]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_2613]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=an [L-cysteine desulfurase]-L-cysteine}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: consumed by=RXN0-308}}
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
{{#set: produced by=RXN-14382}}
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: consumed or produced by=RXN-12587}}
+
{{#set: in pathway=PWY-5064}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:50, 18 March 2018

Reaction RXN-7665

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 H+[c] + 1 dihydrogeranylgeranyl chlorophyll a[c] => 1 tetrahydrogeranylgeranyl chlorophyll a[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_2613
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-5064, chlorophyll a biosynthesis II: PWY-5064
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4822&oldid=27177"