Difference between revisions of "Tiso gene 15142"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Tiso_gene_1444 == * left end position: ** 16376 * transcription direction: ** NEGATIVE * right end position: ** 18034 * centisome position: ** 69.053...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN] ==
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== Gene Tiso_gene_1444 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 16376
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.191 EC-2.3.1.191]
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** NEGATIVE
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* right end position:
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** 18034
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* centisome position:
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** 69.05334   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[UDP-OHMYR-GLUCOSAMINE]][c] '''=>''' 1 [[OH-MYRISTOYL]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''+''' 1 UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine[c] '''=>''' 1 UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_2638]]
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***ec-number
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** [[pantograph]]-[[synechocystis]]
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** experimental_annotation
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== Pathways  ==
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***ec-number
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* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
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* [[RXN-12195]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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** in-silico_annotation
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== Reconstruction information  ==
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***ec-number
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* [[orthology]]:
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** experimental_annotation
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** [[pantograph]]:
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***ec-number
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*** [[synechocystis]]
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* [[RXN-12196]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN0-5462]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=16376}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04550 R04550]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=18034}}
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{{#set: ec number=EC-2.3.1.191}}
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{{#set: centisome position=69.05334    }}
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{{#set: gene associated=Tiso_gene_2638}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: in pathway=NAGLIPASYN-PWY}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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Revision as of 19:51, 18 March 2018

Gene Tiso_gene_1444

  • left end position:
    • 16376
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 18034
  • centisome position:
    • 69.05334
  • Synonym(s):

Reactions associated

  • ATPASE-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • NUCLEOSIDE-TRIPHOSPHATASE-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-12195
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-12196
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN0-5462
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15142&oldid=27302"