Difference between revisions of "CPD-3801"

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(Created page with "Category:Gene == Gene Tiso_gene_4174 == * left end position: ** 1026 * transcription direction: ** POSITIVE * right end position: ** 1474 * centisome position: ** 5.325996...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1125 RXN-1125] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_4174 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1125 RXN-1125] ==
* left end position:
+
* direction:
** 1026
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/1.1.1.195 EC-1.1.1.195]
* right end position:
+
** 1474
+
* centisome position:
+
** 5.3259964   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[TYROSINE--TRNA-LIGASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SINAPALDEHYDE]][c] '''=>''' 1 [[SINAPYL-ALCOHOL]][c] '''+''' 1 [[NADP]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 sinapaldehyde[c] '''=>''' 1 sinapyl alcohol[c] '''+''' 1 NADP+[c]
***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
* [[TRNA-CHARGING-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_15088]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_16681]]
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** [[pantograph]]-[[athaliana]]
 +
== Pathways ==
 +
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=1026}}
+
* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03918 R03918]
{{#set: right end position=1474}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=5.3259964    }}
+
{{#set: ec number=EC-1.1.1.195}}
{{#set: reaction associated=TYROSINE--TRNA-LIGASE-RXN}}
+
{{#set: gene associated=Tiso_gene_15088|Tiso_gene_16681}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=PWY-361}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:53, 18 March 2018

Reaction RXN-1125

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links