Difference between revisions of "SPMDtmi"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_3314 == * left end position: ** 11991 * transcription direction: ** POSITIVE * right end position: ** 14388 * centisome position: ** 70.411...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6550 RXN-6550] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6550 RXN-6550] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * ec number: | |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11] |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** [[ | + | ** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-137]][c] '''=>''' 1 [[CPD-6224]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A4[c] '''=>''' 1 gibberellin A34[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c] | |
| − | + | ||
| − | * | + | == Genes associated with this reaction == |
| − | ** | + | Genes have been associated with this reaction based on different elements listed below. |
| − | + | * [[Tiso_gene_3330]] | |
| − | * [[ | + | ** [[pantograph]]-[[athaliana]] |
| − | ** | + | |
| − | + | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
| − | == Pathways | + | == Pathways == |
| − | * [[PWY- | + | * [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102] |
| − | * [[ | + | ** '''4''' reactions found over '''11''' reactions in the full pathway |
| − | * [[ | + | == Reconstruction information == |
| − | * [[ | + | * Category: [[orthology]] |
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06338 R06338] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-1.14.11}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_3330}} |
| − | {{#set: | + | {{#set: in pathway=PWY-102}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Revision as of 19:53, 18 March 2018
Contents
Reaction RXN-6550
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] + 1 CPD1F-137[c] => 1 CPD-6224[c] + 1 CARBON-DIOXIDE[c] + 1 SUC[c]
- With common name(s):
- 1 2-oxoglutarate[c] + 1 oxygen[c] + 1 gibberellin A4[c] => 1 gibberellin A34[c] + 1 CO2[c] + 1 succinate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- PWY-102, gibberellin inactivation I (2β-hydroxylation): PWY-102
- 4 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
External links
- LIGAND-RXN:
