Difference between revisions of "RXN0-4261"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** cytosolic_fe-s_cluster_assem...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15637 CPD-15637] == * smiles: ** CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15637 CPD-15637] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* inchi key:
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** InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J
 
* common name:
 
* common name:
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** cytosolic_fe-s_cluster_assembly_factor_narfl
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** 6-cis-tridecenoyl-CoA
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.12.7.2 EC-1.12.7.2]
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** 957.819   
 
* Synonym(s):
 
* Synonym(s):
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** 6Z-tridecenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14771]]
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** 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''<=>''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4288]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659199 90659199]
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* UNIPROT:
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{{#set: smiles=CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P27648 P27648]
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{{#set: inchi key=InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J}}
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** [http://www.uniprot.org/uniprot/P31892 P31892]
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{{#set: common name=6-cis-tridecenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O25350 O25350]
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{{#set: molecular weight=957.819    }}
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** [http://www.uniprot.org/uniprot/O67092 O67092]
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{{#set: common name=6Z-tridecenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P31891 P31891]
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{{#set: consumed by=RXN-14771}}
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** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8]
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** [http://www.uniprot.org/uniprot/O66894 O66894]
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** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1]
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** [http://www.uniprot.org/uniprot/P31898 P31898]
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** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0]
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** [http://www.uniprot.org/uniprot/O28891 O28891]
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** [http://www.uniprot.org/uniprot/O66895 O66895]
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** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4]
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** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44]
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** [http://www.uniprot.org/uniprot/Q46508 Q46508]
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** [http://www.uniprot.org/uniprot/O66896 O66896]
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** [http://www.uniprot.org/uniprot/O67095 O67095]
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** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32]
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** [http://www.uniprot.org/uniprot/P13061 P13061]
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** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3]
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** [http://www.uniprot.org/uniprot/P16429 P16429]
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** [http://www.uniprot.org/uniprot/O52683 O52683]
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** [http://www.uniprot.org/uniprot/P13066 P13066]
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** [http://www.uniprot.org/uniprot/O25349 O25349]
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** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1]
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** [http://www.uniprot.org/uniprot/P29166 P29166]
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** [http://www.uniprot.org/uniprot/P07603 P07603]
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** [http://www.uniprot.org/uniprot/P13628 P13628]
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** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8]
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** [http://www.uniprot.org/uniprot/P69739 P69739]
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** [http://www.uniprot.org/uniprot/P12636 P12636]
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** [http://www.uniprot.org/uniprot/P12635 P12635]
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** [http://www.uniprot.org/uniprot/Q59262 Q59262]
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** [http://www.uniprot.org/uniprot/P33375 P33375]
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** [http://www.uniprot.org/uniprot/P33374 P33374]
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** [http://www.uniprot.org/uniprot/P21950 P21950]
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** [http://www.uniprot.org/uniprot/P21949 P21949]
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** [http://www.uniprot.org/uniprot/P23000 P23000]
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** [http://www.uniprot.org/uniprot/Q7M121 Q7M121]
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** [http://www.uniprot.org/uniprot/P15283 P15283]
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** [http://www.uniprot.org/uniprot/P15284 P15284]
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** [http://www.uniprot.org/uniprot/P16430 P16430]
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** [http://www.uniprot.org/uniprot/P16431 P16431]
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** [http://www.uniprot.org/uniprot/P16432 P16432]
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** [http://www.uniprot.org/uniprot/P16433 P16433]
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** [http://www.uniprot.org/uniprot/P17633 P17633]
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** [http://www.uniprot.org/uniprot/P17632 P17632]
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** [http://www.uniprot.org/uniprot/P18191 P18191]
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** [http://www.uniprot.org/uniprot/P18637 P18637]
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** [http://www.uniprot.org/uniprot/P18636 P18636]
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** [http://www.uniprot.org/uniprot/Q46606 Q46606]
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** [http://www.uniprot.org/uniprot/P31875 P31875]
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** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1]
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** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0]
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** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0]
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** [http://www.uniprot.org/uniprot/P31883 P31883]
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** [http://www.uniprot.org/uniprot/P21960 P21960]
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** [http://www.uniprot.org/uniprot/Q43953 Q43953]
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** [http://www.uniprot.org/uniprot/O96948 O96948]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=cytosolic_fe-s_cluster_assembly_factor_narfl}}
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{{#set: ec number=EC-1.12.7.2}}
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{{#set: gene associated=Tiso_gene_4288}}
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{{#set: in pathway=PWY-6780|GLUDEG-II-PWY|PWY-6785|PWY-6759|PWY4LZ-257}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:54, 18 March 2018

Metabolite CPD-15637

  • smiles:
    • CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J
  • common name:
    • 6-cis-tridecenoyl-CoA
  • molecular weight:
    • 957.819
  • Synonym(s):
    • 6Z-tridecenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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