Difference between revisions of "Tiso gene 13463"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
(Created page with "Category:Gene == Gene Tiso_gene_3581 == * left end position: ** 3134 * transcription direction: ** NEGATIVE * right end position: ** 13315 * centisome position: ** 16.5601...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
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== Gene Tiso_gene_3581 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3134
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* common name:
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* transcription direction:
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** tubulin-tyrosine_ligase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
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** 13315
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* centisome position:
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** 16.560106   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
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* With common name(s):
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** 1 detyrosinated α-tubulin[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17589]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5828]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17450]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14575]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3379]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10591]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15094]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10440]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15093]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17234]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20330]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9268]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4516]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[ATPASE-RXN]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[TCX8]]
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*** [[esiliculosus]]
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** [[pantograph]]-[[athaliana]]
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* [[annotation]]:
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== Pathways associated ==
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3134}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=13315}}
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** [http://www.uniprot.org/uniprot/P38160 P38160]
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{{#set: centisome position=16.560106    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|TCX8}}
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{{#set: common name=tubulin-tyrosine_ligase}}
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{{#set: ec number=EC-6.3.2.25}}
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{{#set: gene associated=Tiso_gene_17589|Tiso_gene_5828|Tiso_gene_17450|Tiso_gene_14575|Tiso_gene_3379|Tiso_gene_10591|Tiso_gene_15094|Tiso_gene_10440|Tiso_gene_15093|Tiso_gene_17234|Tiso_gene_20330|Tiso_gene_9268|Tiso_gene_4516}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:02, 19 March 2018

Gene Tiso_gene_3581

  • left end position:
    • 3134
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 13315
  • centisome position:
    • 16.560106
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13463&oldid=28451"