Difference between revisions of "Tiso gene 15848"

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(Created page with "Category:Gene == Gene Tiso_gene_829 == * left end position: ** 21934 * transcription direction: ** POSITIVE * right end position: ** 27885 * centisome position: ** 76.7916...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_829 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] ==
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* left end position:
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* direction:
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** 21934
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
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* right end position:
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** 27885
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* centisome position:
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** 76.79166   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5.99.1.3-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-14424]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14425]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]
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* [[ATPASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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== Pathways  ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** in-silico_annotation
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** '''4''' reactions found over '''7''' reactions in the full pathway
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***ec-number
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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* [[RXN-12195]]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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***ec-number
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-12196]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[annotation]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN0-5462]]
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*** Tool: [[pathwaytools]]
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** in-silico_annotation
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** Source: [[annotation-experimental_annotation]]
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***ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=21934}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.134}}
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{{#set: right end position=27885}}
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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{{#set: centisome position=76.79166    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=5.99.1.3-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:03, 19 March 2018

Reaction RXN-13444

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] => 1 H2O[c] + 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15848&oldid=28460"