Difference between revisions of "RXN0-366"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase...")
(Created page with "Category:Gene == Gene Tiso_gene_20095 == * left end position: ** 8 * transcription direction: ** POSITIVE * right end position: ** 1739 * centisome position: ** 0.45454544...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] ==
+
== Gene Tiso_gene_20095 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 8
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
** adenylate_kinase_domain-containing_protein_1
+
* right end position:
−
** nucleoside_diphosphate_kinase
+
** 1739
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** 0.45454544   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[HGDO]]
−
** 1 [[ATP]][c] '''+''' 1 [[DGDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DGTP]][c]
+
** [[pantograph]]-[[creinhardtii]]
−
* With common name(s):
+
* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
−
** 1 ATP[c] '''+''' 1 dGDP[c] '''=>''' 1 ADP[c] '''+''' 1 dGTP[c]
+
** in-silico_annotation
−
 
+
***automated-name-match
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_16529]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
== Pathways associated ==
−
* [[Tiso_gene_17271]]
+
* [[TYRFUMCAT-PWY]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18224]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17272]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9290]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_195]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[synechocystis]]
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=8}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=1739}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01857 R01857]
+
{{#set: centisome position=0.45454544    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=HGDO|HOMOGENTISATE-12-DIOXYGENASE-RXN}}
−
{{#set: common name=ORF}}
+
{{#set: pathway associated=TYRFUMCAT-PWY}}
−
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
+
−
{{#set: common name=nucleoside_diphosphate_kinase}}
+
−
{{#set: ec number=EC-2.7.4.6}}
+
−
{{#set: gene associated=Tiso_gene_16529|Tiso_gene_17271|Tiso_gene_18224|Tiso_gene_17272|Tiso_gene_9290|Tiso_gene_195}}
+
−
{{#set: in pathway=PWY-7222|PWY-7224|PWY-7226}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 01:03, 19 March 2018

Gene Tiso_gene_20095

  • left end position:
    • 8
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1739
  • centisome position:
    • 0.45454544
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-366&oldid=28474"