Difference between revisions of "CPD-9460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.2....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] == * direction: ** LEFT-TO-RIGHT * common name: ** cytochrome_b6-fcomplexiron-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** cytochrome_b6-fcomplexiron-sulfurchloroplastic
 +
** ubiquinol-cytochrome_c_reductase
 +
** probable_mitochondrial-processingpeptidasesubunitbeta
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[ACETALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[ETR-Quinols]][c] '''=>''' 1 [[ETR-Quinones]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 acetaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 acetate[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
+
** 2 an oxidized c-type cytochrome[e] '''+''' 1 an electron-transfer quinol[c] '''=>''' 1 an electron-transfer quinone[c] '''+''' 2 H+[c] '''+''' 2 a reduced c-type cytochrome[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7322]]
+
* [[Tiso_gene_18330]]
−
** [[pantograph]]-[[synechocystis]]
+
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_15926]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9627]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7235]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4973]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7387]], hypotaurine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7387 PWY-7387]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-161]], ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25295 25295]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00710 R00710]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
−
{{#set: gene associated=Tiso_gene_7322}}
+
{{#set: common name=ubiquinol-cytochrome_c_reductase}}
−
{{#set: in pathway=PWY-7387|PWY66-161|PWY66-21|PWY66-162}}
+
{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.10.2.2}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=Tiso_gene_18330|Tiso_gene_15926|Tiso_gene_9627|Tiso_gene_7235|Tiso_gene_4973}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:04, 19 March 2018

Reaction RXN-15816

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytochrome_b6-fcomplexiron-sulfurchloroplastic
    • ubiquinol-cytochrome_c_reductase
    • probable_mitochondrial-processingpeptidasesubunitbeta
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-9460&oldid=28599"