Difference between revisions of "RXN-15878"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-oxobutanoate_dehydrog...")
(Created page with "Category:Gene == Gene Tiso_gene_26 == * left end position: ** 42708 * transcription direction: ** POSITIVE * right end position: ** 46558 * centisome position: ** 86.16216...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] ==
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== Gene Tiso_gene_26 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 42708
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* common name:
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* transcription direction:
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** 3-methyl-2-oxobutanoate_dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
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** 46558
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* centisome position:
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** 86.16216   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.4.1.119-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[BCAA-dehydrogenase-DH-lipoyl]][c] '''<=>''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** experimental_annotation
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* With common name(s):
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***automated-name-match
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** 1 NAD+[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''<=>''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3260]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9330]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11793]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=42708}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.8.1.4}}
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{{#set: right end position=46558}}
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{{#set: gene associated=Tiso_gene_3260|Tiso_gene_9330|Tiso_gene_11793}}
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{{#set: centisome position=86.16216    }}
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{{#set: in pathway=PWY-5046}}
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{{#set: reaction associated=2.4.1.119-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 00:06, 19 March 2018

Gene Tiso_gene_26

  • left end position:
    • 42708
  • transcription direction:
    • POSITIVE
  • right end position:
    • 46558
  • centisome position:
    • 86.16216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15878&oldid=28731"