Difference between revisions of "Tiso gene 4560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] == * direction: ** REVERSIBLE * common name: ** dna_helicase * ec number: ** [...")
(Created page with "Category:Gene == Gene Tiso_gene_6475 == * left end position: ** 550 * transcription direction: ** NEGATIVE * right end position: ** 2698 * centisome position: ** 4.5111547...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] ==
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== Gene Tiso_gene_6475 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 550
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* common name:
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* transcription direction:
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** dna_helicase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.6.4.12 EC-3.6.4.12]
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** 2698
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* centisome position:
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** 4.5111547   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACYLCOADEHYDROG-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Double-helix-DNA]][c] '''<=>''' 1 [[Unwound-DNA]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 a double-helix DNA[c] '''<=>''' 1 an unwound double-stranded DNA[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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** [[pantograph]]-[[esiliculosus]]
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* [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_1324]]
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***AUTOMATED-NAME-MATCH
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* [[RXN-11734]]
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* [[Tiso_gene_1799]]
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** in-silico_annotation
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***ec-number
 +
* [[RXN-13451]]
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** in-silico_annotation
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***ec-number
 +
* [[RXN-13615]]
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** in-silico_annotation
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***ec-number
 +
* [[RXN-14131]]
 +
** in-silico_annotation
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***ec-number
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* [[RXN-14193]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14229]]
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** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14262]]
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** in-silico_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-14264]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4088]]
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* [[RXN-14278]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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* [[Tiso_gene_4087]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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−
* [[Tiso_gene_7734]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7081]]
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* [[RXN-16540]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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== Pathways  ==
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* [[RXN-16557]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[RXN-17775]]
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*** [[esiliculosus]]
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** in-silico_annotation
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* [[annotation]]:
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***automated-name-match
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** [[pathwaytools]]:
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* [[RXN-17779]]
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*** [[in-silico_annotation]]
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** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17783]]
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** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17784]]
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** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17788]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
* [[RXN-17792]]
 +
** in-silico_annotation
 +
***automated-name-match
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* [[RXN-17796]]
 +
** in-silico_annotation
 +
***automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=550}}
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{{#set: common name=dna_helicase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-3.6.4.12}}
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{{#set: right end position=2698}}
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{{#set: gene associated=Tiso_gene_1324|Tiso_gene_1799|Tiso_gene_4088|Tiso_gene_4087|Tiso_gene_7734|Tiso_gene_7081}}
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{{#set: centisome position=4.5111547    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:09, 19 March 2018

Gene Tiso_gene_6475

  • left end position:
    • 550
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2698
  • centisome position:
    • 4.5111547
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4560&oldid=28998"