Difference between revisions of "1.8.4.9-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17346 CPD-17346] == * smiles: ** CCCCCC=CCC=CCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17346 CPD-17346] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] ==
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* smiles:
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* direction:
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** CCCCCC=CCC=CCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PUWDUOCPCWFEFG-YGYQDCEASA-J
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* common name:
 
* common name:
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** 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA
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** polyketide_synthase
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* molecular weight:
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** ORF
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** 1067.974   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16095]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-7682]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-468]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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* [[RXN-16094]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] '''+''' 1 NAD(P)+[c] '''+''' 2 H2O[c] '''=>''' 1 H+[c] '''+''' 1 L-2-aminoadipate[c] '''+''' 1 NAD(P)H[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16719]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6562]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581045 71581045]
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{{#set: common name=polyketide_synthase}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74012 74012]
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{{#set: gene associated=Tiso_gene_16719|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5425}}
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{{#set: smiles=CCCCCC=CCC=CCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: in pathway=PWY66-425}}
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{{#set: inchi key=InChIKey=PUWDUOCPCWFEFG-YGYQDCEASA-J}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: molecular weight=1067.974    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=RXN-16095}}
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−
{{#set: produced by=RXN-16094}}
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Revision as of 00:12, 19 March 2018

Reaction RXN-10855

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] + 1 NAD(P)+[c] + 2 H2O[c] => 1 H+[c] + 1 L-2-aminoadipate[c] + 1 NAD(P)H[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-425, L-lysine degradation II (L-pipecolate pathway): PWY66-425
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.8.4.9-RXN&oldid=29147"