Difference between revisions of "Tiso gene 16604"

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(Created page with "Category:Gene == Gene Tiso_gene_11630 == * left end position: ** 3410 * transcription direction: ** POSITIVE * right end position: ** 7153 * centisome position: ** 44.5053...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11630 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYCLOARTENOL-SYNTHASE-RXN CYCLOARTENOL-SYNTHASE-RXN] ==
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* left end position:
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* direction:
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** 3410
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/5.4.99.8 EC-5.4.99.8]
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* right end position:
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** 7153
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* centisome position:
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** 44.505352   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[OHMETHYLBILANESYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[EPOXYSQUALENE]][c] '''=>''' 1 [[CYCLOARTENOL]][c]
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***automated-name-match
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* With common name(s):
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* [[UROGENIIISYN-RXN]]
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** 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''=>''' 1 cycloartenol[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14526]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-5189]]
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* [[PWY-7154]], ergosterol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7154 PWY-7154]
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* [[PWY-5188]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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* [[PWY-6115]], avenacin biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6115 PWY-6115]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6109]], mangrove triterpenoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6109 PWY-6109]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3410}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21311 21311]
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{{#set: right end position=7153}}
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* LIGAND-RXN:
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{{#set: centisome position=44.505352    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03200 R03200]
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{{#set: reaction associated=OHMETHYLBILANESYN-RXN|UROGENIIISYN-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5189|PWY-5188}}
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** [http://www.uniprot.org/uniprot/O23909 O23909]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-5.4.99.8}}
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{{#set: gene associated=Tiso_gene_14526}}
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{{#set: in pathway=PWY-7154|PWY-2541|PWY-6115|PWY-6109|PWY-7155|PWY-6098}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 01:13, 19 March 2018

Reaction CYCLOARTENOL-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] => 1 cycloartenol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7154, ergosterol biosynthesis II: PWY-7154
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway
  • PWY-6115, avenacin biosynthesis, initial reactions: PWY-6115
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6109, mangrove triterpenoid biosynthesis: PWY-6109
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7155, 7-dehydroporiferasterol biosynthesis: PWY-7155
    • 3 reactions found over 10 reactions in the full pathway
  • PWY-6098, diploterol and cycloartenol biosynthesis: PWY-6098
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16604&oldid=29231"