Difference between revisions of "Tiso gene 11923"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] == * smiles: ** C(O)C(O)C(O)CC=O * inchi key: ** InChIKey=ASJSAQIR...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] ==
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* smiles:
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* direction:
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** C(O)C(O)C(O)CC=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* common name:
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** 2'-deoxyribose
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* molecular weight:
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** 134.132   
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* Synonym(s):
 
* Synonym(s):
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** deoxyribose
 
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** 2-deoxyribose
 
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** 2-deoxy-D-ribose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[NONAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-14223]]
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* With common name(s):
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** 1 all-trans-nonaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 3-nonaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11582]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6978]], plastoquinol-9 biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6978 PWY-6978]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 533-67-5
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17709 17709]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10786 10786]
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* LIGAND-RXN:
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* HMDB : HMDB03224
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** [http://www.genome.jp/dbget-bin/www_bget?R07273 R07273]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01801 C01801]
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{{#set: ec number=EC-2.5.1.39}}
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* CHEMSPIDER:
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{{#set: gene associated=Tiso_gene_11582}}
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** [http://www.chemspider.com/Chemical-Structure.10330.html 10330]
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{{#set: in pathway=PWY-5871|PWY-5856|PWY-6978}}
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* CHEBI:
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{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=131350 131350]
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{{#set: reconstruction source=orthology-synechocystis}}
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* METABOLIGHTS : MTBLC28816
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C(O)C(O)C(O)CC=O}}
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{{#set: inchi key=InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N}}
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{{#set: common name=2'-deoxyribose}}
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{{#set: molecular weight=134.132    }}
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{{#set: common name=deoxyribose|2-deoxyribose|2-deoxy-D-ribose}}
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{{#set: consumed or produced by=RXN-14223}}
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Revision as of 01:15, 19 March 2018

Reaction 2.5.1.39-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5871, ubiquinol-9 biosynthesis (eukaryotic): PWY-5871
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5856, ubiquinol-9 biosynthesis (prokaryotic): PWY-5856
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6978, plastoquinol-9 biosynthesis II: PWY-6978
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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