Difference between revisions of "Tiso gene 3006"

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(Created page with "Category:Gene == Gene Tiso_gene_1163 == * left end position: ** 12300 * transcription direction: ** POSITIVE * right end position: ** 14054 * centisome position: ** 48.240...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] == * direction: ** REVERSIBLE * common name: ** urease ** urease_accessory_p...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1163 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] ==
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* left end position:
+
* direction:
−
** 12300
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** urease
−
* right end position:
+
** urease_accessory_protein
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** 14054
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/3.5.1.5 EC-3.5.1.5]
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** 48.240967   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
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== Reaction Formula ==
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* [[DIACYLGLYKIN-RXN]]
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* With identifiers:
−
** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[UREA]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 2 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
***ec-number
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* With common name(s):
−
* [[NAD-KIN-RXN]]
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** 1 H2O[c] '''+''' 1 urea[c] '''+''' 2 H+[c] '''<=>''' 2 ammonium[c] '''+''' 1 CO2[c]
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** in-silico_annotation
+
 
−
***ec-number
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== Genes associated with this reaction  ==
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* [[RXN3DJ-11417]]
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Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
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* [[Tiso_gene_3909]]
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***automated-name-match
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** IN-SILICO_ANNOTATION
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* [[SPHINGANINE-KINASE-RXN]]
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
−
* [[PWY3DJ-11470]]
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* [[Tiso_gene_794]]
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* [[PWY-7268]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7269]]
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***EC-NUMBER
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* [[PWY-7817]]
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** EXPERIMENTAL_ANNOTATION
−
* [[PWY-5129]]
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***EC-NUMBER
−
* [[PWY-5083]]
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== Pathways ==
−
* [[NADPHOS-DEPHOS-PWY-1]]
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* [[PWY-5704]], urea degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5704 PWY-5704]
−
* [[PWY-7119]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7039]]
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== Reconstruction information  ==
−
* [[NADPHOS-DEPHOS-PWY]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=12300}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00131 R00131]
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{{#set: right end position=14054}}
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* UNIPROT:
−
{{#set: centisome position=48.240967    }}
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** [http://www.uniprot.org/uniprot/P17337 P17337]
−
{{#set: reaction associated=DIACYLGLYKIN-RXN|NAD-KIN-RXN|RXN3DJ-11417|SPHINGANINE-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P18316 P18316]
−
{{#set: pathway associated=PWY3DJ-11470|PWY-7268|PWY-7269|PWY-7817|PWY-5129|PWY-5083|NADPHOS-DEPHOS-PWY-1|PWY-7119|PWY-7039|NADPHOS-DEPHOS-PWY}}
+
** [http://www.uniprot.org/uniprot/Q07399 Q07399]
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** [http://www.uniprot.org/uniprot/P44393 P44393]
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** [http://www.uniprot.org/uniprot/P17338 P17338]
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** [http://www.uniprot.org/uniprot/Q07398 Q07398]
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** [http://www.uniprot.org/uniprot/P17088 P17088]
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** [http://www.uniprot.org/uniprot/Q03282 Q03282]
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** [http://www.uniprot.org/uniprot/Q9R5F8 Q9R5F8]
 +
** [http://www.uniprot.org/uniprot/P17339 P17339]
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** [http://www.uniprot.org/uniprot/Q07397 Q07397]
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** [http://www.uniprot.org/uniprot/P17087 P17087]
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** [http://www.uniprot.org/uniprot/Q08716 Q08716]
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** [http://www.uniprot.org/uniprot/P17086 P17086]
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** [http://www.uniprot.org/uniprot/Q9R2X6 Q9R2X6]
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** [http://www.uniprot.org/uniprot/Q9R5F6 Q9R5F6]
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** [http://www.uniprot.org/uniprot/Q9R5F5 Q9R5F5]
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** [http://www.uniprot.org/uniprot/Q9R5F4 Q9R5F4]
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** [http://www.uniprot.org/uniprot/P44391 P44391]
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** [http://www.uniprot.org/uniprot/P44392 P44392]
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** [http://www.uniprot.org/uniprot/P16124 P16124]
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** [http://www.uniprot.org/uniprot/P16123 P16123]
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** [http://www.uniprot.org/uniprot/P16122 P16122]
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** [http://www.uniprot.org/uniprot/P17274 P17274]
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** [http://www.uniprot.org/uniprot/P17273 P17273]
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** [http://www.uniprot.org/uniprot/P17272 P17272]
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** [http://www.uniprot.org/uniprot/P31496 P31496]
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** [http://www.uniprot.org/uniprot/Q08715 Q08715]
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** [http://www.uniprot.org/uniprot/P31494 P31494]
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** [http://www.uniprot.org/uniprot/P42875 P42875]
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** [http://www.uniprot.org/uniprot/P42874 P42874]
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** [http://www.uniprot.org/uniprot/P42873 P42873]
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** [http://www.uniprot.org/uniprot/Q9R5X1 Q9R5X1]
 +
** [http://www.uniprot.org/uniprot/Q41214 Q41214]
 +
** [http://www.uniprot.org/uniprot/P42887 P42887]
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** [http://www.uniprot.org/uniprot/P42886 P42886]
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** [http://www.uniprot.org/uniprot/P42885 P42885]
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** [http://www.uniprot.org/uniprot/P41022 P41022]
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** [http://www.uniprot.org/uniprot/P41021 P41021]
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** [http://www.uniprot.org/uniprot/P41020 P41020]
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** [http://www.uniprot.org/uniprot/P73796 P73796]
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** [http://www.uniprot.org/uniprot/P73061 P73061]
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** [http://www.uniprot.org/uniprot/P08298 P08298]
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** [http://www.uniprot.org/uniprot/O86508 O86508]
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** [http://www.uniprot.org/uniprot/O00084 O00084]
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** [http://www.uniprot.org/uniprot/Q9RFF5 Q9RFF5]
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** [http://www.uniprot.org/uniprot/Q9RFF4 Q9RFF4]
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** [http://www.uniprot.org/uniprot/Q9RFF2 Q9RFF2]
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** [http://www.uniprot.org/uniprot/P07374 P07374]
 +
** [http://www.uniprot.org/uniprot/P14916 P14916]
 +
** [http://www.uniprot.org/uniprot/P69996 P69996]
 +
** [http://www.uniprot.org/uniprot/P69997 P69997]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=urease}}
 +
{{#set: common name=urease_accessory_protein}}
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{{#set: ec number=EC-3.5.1.5}}
 +
{{#set: gene associated=Tiso_gene_3909|Tiso_gene_794}}
 +
{{#set: in pathway=PWY-5704}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:17, 19 March 2018

Reaction UREASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • urease
    • urease_accessory_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_3909
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER
  • Tiso_gene_794
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-5704, urea degradation II: PWY-5704
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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