Difference between revisions of "RXN-13198"

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(Created page with "Category:Gene == Gene Tiso_gene_15256 == * left end position: ** 2323 * transcription direction: ** NEGATIVE * right end position: ** 5023 * centisome position: ** 45.2914...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphatidate_c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15256 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] ==
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* left end position:
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* direction:
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** 2323
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** phosphatidate_cytidylyltransferase
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* right end position:
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* ec number:
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** 5023
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** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41]
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* centisome position:
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** 45.29148   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACID-PHOSPHATASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[PPI]][c]
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***ec-number
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* With common name(s):
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** 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 CTP[c] '''=>''' 1 a CDP-diacylglycerol[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2311]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3523]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[RXN-5822]]
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* [[Tiso_gene_3522]]
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** in-silico_annotation
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***ec-number
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* [[RXNQT-4191]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-6907]]
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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* [[PWY-6348]]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-7356]]
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* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
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* [[PWY-6908]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]]
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* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
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* [[PWY-5083]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY]]
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* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2323}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16229 16229]
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{{#set: right end position=5023}}
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* LIGAND-RXN:
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{{#set: centisome position=45.29148    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799]
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822|RXNQT-4191}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6907|PWY-6348|PWY-7356|PWY-6908|NAD-BIOSYNTHESIS-II|PWY-5083|NADPHOS-DEPHOS-PWY}}
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** [http://www.uniprot.org/uniprot/Q9JX34 Q9JX34]
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** [http://www.uniprot.org/uniprot/Q9PMV2 Q9PMV2]
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** [http://www.uniprot.org/uniprot/Q59640 Q59640]
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** [http://www.uniprot.org/uniprot/P73548 P73548]
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** [http://www.uniprot.org/uniprot/P0ABG1 P0ABG1]
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** [http://www.uniprot.org/uniprot/O04940 O04940]
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** [http://www.uniprot.org/uniprot/Q49433 Q49433]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphatidate_cytidylyltransferase}}
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{{#set: ec number=EC-2.7.7.41}}
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{{#set: gene associated=Tiso_gene_2311|Tiso_gene_3523|Tiso_gene_3522}}
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{{#set: in pathway=PWY-7817|PWY-5667|PWY-5981|PWY0-1319}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:17, 19 March 2018

Reaction CDPDIGLYSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphatidate_cytidylyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] + 1 CTP[c] => 1 a CDP-diacylglycerol[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13198&oldid=29571"